Orbus sturtevantii: RHO12_04510
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Entry
RHO12_04510 CDS
T10535
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
osv Orbus sturtevantii
Pathway
osv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHO12_04510 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osv03019
]
RHO12_04510 (rhlB)
Enzymes [BR:
osv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RHO12_04510 (rhlB)
Messenger RNA biogenesis [BR:
osv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RHO12_04510 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
WVD67044
LinkDB
All DBs
Position
1023647..1024891
Genome browser
AA seq
414 aa
AA seq
DB search
MAQSYLTQTLFEQFDLHPFVLNALQKNGFSYCTPIQEQSLAFTLKGLDIAGQGQTGTGKT
IAFLTATFNYLLNNAAPEGRKKNQPRAVIIAPTRELAVQIHNDAQIFADIANLRLGLAFG
GDGYDKQLKVLADGVDILIATTGRLIDYAKQDYINLEAVQVVVLDEADRMFDLGFIRDIR
WLFRHMTPPKKRLTMLFSATLSHNVRELAFEHMNEPKYIEVEPEQKIGHRIKEELFFPSN
EDKLALLQTLIEEEWPDRAIIFANTKIACEKIWRHLAADGLRVGLLNGDIAQKKRLAVLE
KFTQGDLDILVATDVAARGLHIPHVTHVFNYDLPDDSDDYRHRIGRTGRAGDDGHSISFA
CEKYAHNLPAIEIAIEHAIPVSHYDPSALLTDLPKPKTPRQFNQRRTKRPATKA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcctatcttactcaaactctttttgaacaatttgacttacatccgtttgtg
ctcaatgcattgcaaaaaaatggtttttcttattgtaccccaattcaagaacagtcttta
gcttttactctaaaaggacttgatatagcaggacaaggacaaaccggcacaggaaaaaca
attgcatttttaacagcaacgttcaactatttattgaataatgcggctcctgaaggtcgt
aaaaaaaatcaaccaagagcagtaattatagctccgacgagagagcttgctgtgcaaatt
cacaatgatgctcaaatttttgccgatattgcaaacctacgtttaggcttagcatttggt
ggggatggctatgataaacaactaaaagtactcgctgatggcgtcgatatcttgattgca
acgaccggacggttaattgattatgcaaagcaagactacatcaatttagaagctgtacaa
gttgttgtattagatgaagcagatcgaatgtttgatttaggatttattcgtgatattcgt
tggctatttcgccacatgaccccaccgaaaaaacgacttaccatgttattttcggcgacc
ttatctcataatgttagagaactcgcatttgagcatatgaatgaacctaaatatatcgaa
gttgaacctgagcaaaaaattggtcatcgaattaaagaagagttattttttccatctaat
gaagataagctagcattattacaaacccttattgaagaagaatggccagatcgcgctatt
atttttgctaatactaaaatcgcctgtgaaaaaatctggcgtcacctagccgctgatggt
cttcgtgttggtttacttaatggtgatatagcacagaaaaaacgcctcgctgtacttgaa
aaatttacgcaaggcgatttggatattttagtcgcgacagatgtagcagccaggggattg
catattccgcatgttactcatgtctttaactatgatctccctgatgatagtgatgattac
cgtcatcgcatcggtaggacgggtcgagccggcgatgatggtcactcgatttcatttgcc
tgtgagaaatatgcacataatctacccgccattgagattgcaattgaacatgcaataccg
gttagtcactatgaccctagcgctttattaacagatctacctaaaccaaaaactccgcgc
caatttaaccaacgtcgcactaagcgaccagccaccaaagcataa
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