Orbus sturtevantii: RHO12_04985
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Entry
RHO12_04985 CDS
T10535
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
osv Orbus sturtevantii
Brite
KEGG Orthology (KO) [BR:
osv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
osv03016
]
RHO12_04985
Enzymes [BR:
osv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RHO12_04985
Transfer RNA biogenesis [BR:
osv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RHO12_04985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
Motif
Other DBs
NCBI-ProteinID:
WVD67135
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Position
1124211..1126151
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AA seq
646 aa
AA seq
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MLQDNPLLAQLKQQFHAQIPRAEGIVKSHEKGYGFLETDNKKSYFISATKMKKVIDGDKV
SGILVQNGDKTAFEPETLLEPALNVFLGQVHFNNGVIGVIPEHVTKLLIKCKVGNDIQQS
LQEGDWVKVQLISHPLKDNDDFFAEIIQFITKDESVDLMWLLALARYNLDFCAPVGINPP
QLQEDKNLTRLDLTNRYFFTVDNKDTRDMDDALSIIKNEQGNYKVTIAIADPSSYINENS
ELDNIAYQRSFSTYLSGFTVPMLPTSLANELCSLEENQQRSALVCEVVVTSDGDIIYDSV
QFHLAWVVSKAKLTYDDVSNFIDNNIPLATDNDRLLEQLTWLAELATIRTNWRNKNALLF
KNNHEYRFVFDCDKQLIAINKEVKQTAHKMIEEAMIIANQVFTHQVKTQLGFGIFNIHLG
FDSKYIDSALKLLRENQIDGFDKEKLSSFDGYRDLRHIVENNEFLEYRLRRFQASTDFSI
EPDAHFALGFDAYATWTSPIRKYGDLFNHRLIKAILAKTTHSRPDKALLSIMNERRKAVR
LAEREVNSKLYCQFLAEKIGQQFEAQIINLNRGGIKARLIDNGAIVFVPASLVHSVRNEL
ELLPEDGKIKIKGELKYQLLDTISVTINEIKPESLTVIAKLTGQSK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgctacaagataacccattacttgcccaacttaagcaacaatttcatgctcaaataccc
cgtgctgaagggatcgtaaaatcgcatgaaaaaggctatggttttttagagacagataat
aaaaaaagctattttatttctgccactaaaatgaaaaaagtcattgatggtgataaagtc
tccggtattttagtacaaaatggtgataaaactgcttttgaaccagaaacattacttgaa
ccagcactaaatgtttttttggggcaggtgcattttaataatggagtaataggtgttatt
cctgaacatgtaaccaaattattaatcaagtgcaaagtcggcaatgatattcaacaatcc
cttcaagagggtgattgggtaaaagtacaattaatttctcatccgcttaaggataacgac
gatttttttgctgagattatacaatttattactaaagatgagtctgtagatcttatgtgg
cttttagcgcttgcccgatataatctagatttctgtgcacctgtcggtatcaaccctccc
caattacaagaagataaaaatttaacgagactcgatttaacaaatcgctatttttttacc
gtcgataataaagatacacgcgatatggatgatgccttgtcaataataaaaaatgaacaa
ggtaattacaaagtaactattgctattgctgatccaagtagctatatcaatgaaaatagt
gaattagataatatcgcttatcagcgtagtttttcaacttatttatcaggtttcaccgta
ccaatgttgcctacatcattagccaatgagctctgttcactcgaggaaaaccagcagcgt
tctgcattagtttgtgaggttgttgtaacatcagatggtgacattatttatgattccgtg
caatttcacttagcatgggtagtatcgaaagcgaagctaacttatgacgatgtatctaat
tttatcgacaacaacatacctttagccactgataatgatagactgttagagcagctaaca
tggctcgctgaacttgcaactatccgaactaattggcgtaataaaaatgccttattattt
aagaataatcatgaatatcgttttgtttttgattgcgacaaacaattaatcgcaattaat
aaagaggtcaaacagaccgcacataagatgattgaggaggccatgattattgctaatcaa
gtttttacacatcaagtaaagacacagttaggattcggaatatttaatattcatttgggt
tttgatagtaagtatattgattcagcacttaagttattgagagaaaaccaaattgatgga
ttcgataaagagaaattgtcttcttttgatggctatagggatctacgccatattgttgaa
aataatgagtttcttgagtaccgattaagacgttttcaagcttcgactgatttttcaatt
gagccagatgctcattttgctttaggatttgatgcttatgcaacttggacatcccctatt
cgaaaatatggagatttatttaaccatcgcttaattaaagcaatattggcaaaaaccact
catagtcgacctgataaagcgcttttatcaataatgaatgaacggcgtaaagcagttcga
ctagctgaacgagaggttaatagtaaactatattgtcaatttttagctgaaaaaattggt
cagcagttcgaagctcaaattattaaccttaaccgtggtggaataaaagctcgtttaatt
gataatggtgcgatcgtatttgtcccagcatcattggttcattcagttcgcaatgaatta
gagctcttacctgaagatgggaagataaaaattaaaggtgagctaaaatatcagttactt
gacaccatatcggtaacaattaatgaaataaagccagaatcattgactgttatagccaaa
ttgacaggacaatcaaaataa
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