Orbus sturtevantii: RHO12_05645
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Entry
RHO12_05645 CDS
T10535
Name
(GenBank) oligogalacturonate lyase family protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
osv Orbus sturtevantii
Pathway
osv00040
Pentose and glucuronate interconversions
osv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RHO12_05645
Enzymes [BR:
osv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
RHO12_05645
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
Tricorn_2nd
Tricorn_N
PD40
DPPIV_N
Motif
Other DBs
NCBI-ProteinID:
WVD67258
LinkDB
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Position
complement(1278730..1279902)
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AA seq
390 aa
AA seq
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MAKGNIVRLTFSSFIDEDSKNEIIRLTPEGVLCHRNYFYQKCFTNDGQKILFAGEFDKKR
NYYLLDLKDQTATQLTEGTGDNTFGGFLSPDDKFLYYVKNERNLQRVELETLEEKNIYSV
PDDWVGYGTWVANSDCTQIVGIEIAKKDWTPLTDWELFKSFYDKNPRCRLININIHSGKA
KTVIDQNVWLGHPIFRPFHDETIAFCHEGPHDLVDARMWLVNSDGTNERKAHEHQPGESC
THEFWLPNGSGLAYVSYMKGQQERYIRIYNPDTKQDSLIMEMPACSHLMSNFDGSLYIGD
GSGSPVDVKDTGGYKIENDPWLYILTPKNKRVHKLVKHNSSWRVLDGDRQVTHPHPSFSP
NNEYVLYSCDAKDVPALYLTKVPTAILNEM
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggctaagggaaatatcgtaagattaacattttcatcgtttattgatgaagattctaaa
aatgaaattattcgattaactcctgaaggagtactttgccaccgtaactatttttaccaa
aagtgttttactaatgacgggcagaaaatcctttttgctggcgagttcgataaaaaacgt
aactattatttactcgatctaaaagatcaaacagcgacgcaacttactgaagggactgga
gataatacctttggtggctttctctcgccagatgataaatttttatactatgtaaaaaat
gaacgaaatttacagcgagtcgaacttgaaacgttagaagagaaaaacatctattcggtt
cctgatgattgggttggttatggcacatgggttgcgaactctgattgtacacaaattgtg
ggaatcgagattgccaaaaaagattggacgcctttaactgattgggaattgtttaaatca
ttttatgataaaaatccgcgttgcagattgattaatataaatattcatagcggaaaagcg
aaaacagttattgaccaaaatgtgtggctaggtcatccaatttttagaccatttcatgac
gagacaattgctttttgtcatgaaggtccccacgatttagtcgatgcgcgaatgtggcta
gttaatagcgatggaacaaatgaaagaaaagcgcatgaacatcagccaggtgaaagttgt
acccatgaattttggttaccaaacggttctgggcttgcttatgtttcttatatgaaagga
caacaagaaaggtatattcgaatttataatccagatactaaacaagattctcttattatg
gaaatgcctgcttgttctcatttaatgagtaattttgatggttctctttatattggtgat
ggttctggtagccctgttgatgtaaaggatacgggggggtataaaattgaaaatgatcct
tggttatatattttgacgccaaaaaataaaagagtacataaactggttaaacataatagc
tcttggcgagtattagatggcgatcgtcaagtaactcatcctcatccttcattttcgcct
aataatgaatatgtactatattcttgtgatgcaaaggatgtgcctgctctctacttaaca
aaagtacctacagctattttaaatgaaatgtaa
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