Orbus sturtevantii: RHO12_05665
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Entry
RHO12_05665 CDS
T10535
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
osv Orbus sturtevantii
Pathway
osv00040
Pentose and glucuronate interconversions
osv01100
Metabolic pathways
osv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
osv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RHO12_05665
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHO12_05665
Enzymes [BR:
osv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
RHO12_05665
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Paralog
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
WVD67262
LinkDB
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Position
complement(1283961..1285121)
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AA seq
386 aa
AA seq
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MKKLINASIILLAVYSLSVSALPSFPIMIEQAKDVAPANGFGGFDKVTNTGTIGGSKADS
SMVFLVKNKQALLTAININKGQPRIIQISGIIDMSENQPYQDFDDQRARSLIRIPSNTTL
IGVDENAGFIHGSLVLSNVSNVIIRNLHIESPVDIAPKFEEGDGWNAEWDGINVIASTYI
WIDHVTFTDGPFTDDQYTKKDGWKYVQHDGLLDIKRGSDFITVSYCFFENHDKTILIGHN
DKNDNQDENKLHITFHHNVFANVRQRTPRVRFGKIHMYNNFFEGSTDKSKIVYPYFYSIG
LGVKSSVISENNLFLIDGLKDSCKIVKAFNSNNIRDTNSVFNHASLDWSKCHFDNKTNWS
IPYKYELDPVNNTRLNYEKLAGNGKF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactaataaatgcatcaataatacttttagctgtatattctttatcggtcagt
gctttgccttcatttcctattatgattgaacaagctaaggatgttgcaccagctaatggt
tttggtggttttgataaagtgactaataccggtaccataggtggatcaaaagctgatagc
agtatggtttttttagtcaaaaataagcaagcgttgttaactgctattaatattaataaa
gggcaacctcggattattcaaatttcaggcattattgacatgagtgaaaaccagccgtat
caagattttgatgaccaaagagcacgttctttaattagaattcccagtaatacaacatta
attggcgttgatgagaatgcagggtttattcatggttcattggttttatcaaacgttagc
aacgttattattcgtaacttacatatagagtctccagtcgatattgcaccaaaatttgaa
gagggcgatggttggaacgctgaatgggatgggataaatgttattgcctccacttatatt
tggattgaccatgtaacatttactgatggaccatttaccgatgatcaatatacaaaaaaa
gatggttggaaatatgttcagcatgacggcttattagatataaaacggggtagcgatttt
attactgtatcttattgtttttttgaaaatcatgataaaacgatccttattggtcataat
gataaaaatgataatcaagatgaaaataaattgcatatcacatttcatcataatgttttt
gctaatgttcgccagcgcacgccaagagtccgttttggcaaaatacatatgtacaataat
ttttttgaaggttcaaccgacaaatcaaaaatagtttacccttacttttactcgattggt
ttaggcgttaaaagtagtgtcatttctgaaaataacctctttttaatcgatggcttgaag
gatagctgcaaaatagtcaaagcgtttaacagcaataacattcgagatactaattcagtt
tttaatcacgcatcgttggattggagcaaatgtcattttgataataaaactaattggtct
atcccttataaatatgagttagatcctgtcaataacacgcgtcttaattatgaaaaacta
gccggcaatggcaagttttaa
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