Orbus sturtevantii: RHO12_06870
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Entry
RHO12_06870 CDS
T10535
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
osv Orbus sturtevantii
Brite
KEGG Orthology (KO) [BR:
osv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
osv03016
]
RHO12_06870 (truB)
Enzymes [BR:
osv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RHO12_06870 (truB)
Transfer RNA biogenesis [BR:
osv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RHO12_06870 (truB)
Prokaryotic type
RHO12_06870 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WVD65113
LinkDB
All DBs
Position
complement(1582126..1583034)
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AA seq
302 aa
AA seq
DB search
MARKRKGRDVQGVLLLDKPAGMTSNDVLQKVKRVFNAQKAGHTGALDPLATGMLPICFGE
STKFSQYLLDSDKRYRVIARLGQRTDTSDSDGQIIAEKLVKVIQPDIEQGLIHFRGDIMQ
IPTMFSALKYQGRPLYEYARQGITIERQPRPITVYENRFIAFNNNELELEIHCSKGTYIR
TIIDDLGELLGCGAHIIYLRRLQVSNYPSDKMVSLSFIQEHASNIELLDSLLLSVDSPVQ
DHAKIALTDEQGRDILLGRTIEISQSTVQTQLVRLYQQTLFIGIGQWLNNSISPKRLIQT
EQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaagcgcaaaggtcgggatgttcaaggtgttttactgttagataaaccagcg
ggtatgacatcaaatgacgtattacaaaaagtaaaacgagtatttaatgcccaaaaagcg
ggtcatacgggagccttagatcctcttgcaaccggaatgttgccgatttgttttggcgaa
tcaactaaattttcacaatatctgctagattcggataaacgttatcgtgtgattgcacgt
ttaggccaaagaacggatacttcagattcagacggacaaattattgcggaaaagctggtt
aaggtcattcaaccagatattgaacagggattaattcactttagaggtgatattatgcaa
atccctaccatgttttccgctttaaagtatcaaggtcgcccgctttacgaatatgccaga
caaggaattactattgaacggcaaccaaggccgattactgtatatgaaaatcgttttatt
gcttttaataataatgaattagaacttgaaattcactgctctaagggaacttatattcgt
actattattgatgatcttggcgagttattgggatgcggtgcacatattatctatttacgt
cggttacaagtatcaaattaccctagtgataaaatggtctcattatcgtttattcaagaa
catgctagtaatattgagctacttgattcactgttattatctgttgatagtcctgtgcaa
gatcatgctaaaatagcgctaaccgatgagcaggggcgcgatattttattaggtagaaca
atcgaaattagtcagtcgacagtgcaaactcagttagttaggttatatcagcaaacgctc
tttattggtatcggtcaatggctcaataattcgatatcaccaaagcgattaattcaaacg
gaacaataa
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