Orbus sturtevantii: RHO12_12405
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Entry
RHO12_12405 CDS
T10535
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
osv Orbus sturtevantii
Pathway
osv03420
Nucleotide excision repair
osv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
osv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RHO12_12405 (uvrD)
03430 Mismatch repair
RHO12_12405 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osv03400
]
RHO12_12405 (uvrD)
Enzymes [BR:
osv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHO12_12405 (uvrD)
DNA repair and recombination proteins [BR:
osv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RHO12_12405 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RHO12_12405 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
PhoH
EF-hand_1
Motif
Other DBs
NCBI-ProteinID:
WVD66152
LinkDB
All DBs
Position
2813600..2815855
Genome browser
AA seq
751 aa
AA seq
DB search
MKASLLAQLNQEQQNTVTTDSQYTLVLAGAGSGKTRVLVHRIAWLCLEKHYQAGSIFAVT
FTNKAAAEMQERIKSLIGEAHFNGMWVGTFHGLAHRLLRIFAKQAGLPTNFQLIDNDDQN
RLIKRIFKERKIDEKQWSSKECSAFISTQKEHGLRAKDIAIDDPKSAMWQKIYIDYQAIC
DRVGYVDFSEIILRTYELLKTNQEALTYCNQRFTNILVDEFQDTNYIQYQLVKILVGQTA
NVMIVGDDDQSIYSWRGANADNLQLFINDYPETEIIRLEQNYRSTGSILQLANALITNNS
NRLGKNLWTESEQGQAVAVYVGFNDIDEARFVVGQIKKLHEDNTHYRDCAILYRNNAQSR
LLEDTLLQTGIPYQIYGSIRFYERQEVKLALAYLRLLHDHNNDNAFELVVNTPTRGIGEV
TLNKIRQLARSHNQSMWQTTIQAIAMKAITPRQSSGLARFIELIQSIYQDVESLPFYQQL
EQITKVSGIYEMYEQEAGIKGQSRLENLDELVSAAEQFYQQYDKDSSQQINQDELIDVQS
NTLNVLELFLAYTSLEGKENKNNTDSVQLMTLHSAKGLEFDHVFIVGLEEGIFPAQRSIT
DPQKMEEERRLAYVGITRARKHLTLTLSELRRLYGKEERNLPSRFLAELPPELLQDLSYR
RAITFAKSSSDDVLNGEEQQKQFLDERKASFIKSQSNNQGYTLGRKVVHKRFGEGTIVNL
DGEGEHKRAQIAFVNEGVKWLVIKLANLTLL
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcatctttactcgctcagctaaatcaagaacaacaaaatacagttacaaccgat
agccagtatactttagtattagctggagcagggagtggcaaaacccgggtgctggttcat
cgaatcgcctggttatgcttagagaaacattatcaagctggctcaatttttgctgtaaca
tttaccaataaagctgcggcagaaatgcaggaacgtattaaatctttaatcggtgaagcg
catttcaatggtatgtgggtcggaacattccatgggcttgcacatcgtttactacgcatt
tttgctaagcaagcaggtttacctactaattttcagctaattgataacgatgatcaaaat
cgcttaattaaacgaatttttaaagaacgtaaaattgatgaaaaacagtggtcatcgaaa
gagtgcagtgcgtttatttctacacaaaaagagcatgggctaagagctaaggatattgct
attgatgatcctaaaagcgccatgtggcagaaaatttatattgattatcaagccatatgt
gatcgagttggttatgtcgatttttctgaaataattttaagaacttatgaattactaaaa
accaaccaagaagcgttaacctattgcaatcaacgctttactaatattttggtcgatgag
tttcaagataccaactatattcaatatcaattagttaaaattttagttgggcaaaccgcg
aatgtgatgattgttggtgatgatgatcagtctatttatagctggcgcggggctaatgct
gataatttacagctatttattaatgactatcctgagaccgaaattattcgtttagaacaa
aattaccgttcaactggcagtattttacagctggctaatgcacttattactaataatagt
aatcgattaggtaaaaatttgtggactgaaagtgagcaaggccaagcagttgctgtttat
gttggatttaatgatattgatgaagcgcgttttgtggttggtcaaattaaaaaattgcat
gaagataatactcattatcgagattgtgccattttatatcgtaataacgctcagtcgcgt
ttattagaagatactttattgcaaacaggcattccttatcaaatttatggctctattcgc
ttttatgaacggcaagaagttaaattagcactggcttacttgcgtttactgcatgaccat
aataatgataatgcgtttgaattagttgttaatacccccactcgaggtattggtgaggtt
accctaaataaaatccgccagctagcgcgctcgcacaatcaatcaatgtggcagacaacg
attcaagcaattgcgatgaaagcaattacaccaaggcaaagttcaggtttagcccgattt
attgaattgatacagtctatttatcaagatgtggagtcgttgccattttaccagcagcta
gaacagatcactaaagtttcgggtatttatgaaatgtacgagcaagaggcgggcataaaa
ggccaatcaaggctagaaaatttagatgaattagtcagtgctgctgagcagttttatcag
cagtatgataaagatagtagtcagcaaattaaccaagatgaattgattgatgtgcaaagt
aatacgttaaatgtattagaactatttcttgcttatacgtcattagaaggcaaagagaat
aaaaataatactgatagtgtacagttaatgacgctacattcggctaaaggtttagaattt
gatcacgtgtttattgtcggtttagaagagggcatttttcctgctcaacgttcaattact
gaccctcaaaaaatggaagaagaacgtcggcttgcatatgtaggtattaccagggcacgt
aaacatttaaccttaacattatccgagctacgacgtctgtatggtaaagaagaacgtaat
ttgccttcgcgctttttagctgagttaccaccggagttgctacaagacttaagctatcga
cgagcgattacttttgccaaatcatcatctgacgatgtacttaatggcgaagaacaacaa
aaacaatttttggatgagcgaaaagcatcatttattaaaagccaatcaaataatcaaggt
tatactttggggcggaaagtggtacataagcgttttggcgaaggtacgattgttaatctt
gatggtgaaggggagcacaagcgcgcacaaattgcttttgtaaatgaaggtgttaagtgg
ttagtcataaaattagcaaacttaactttgttataa
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