Ostreococcus tauri: OT_ostta01g01720
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Entry
OT_ostta01g01720 CDS
T01358
Name
(RefSeq) RNA polymerase, beta subunit, conserved site
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ota
Ostreococcus tauri
Pathway
ota03020
RNA polymerase
ota03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OT_ostta01g01720
09124 Replication and repair
03420 Nucleotide excision repair
OT_ostta01g01720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ota03021
]
OT_ostta01g01720
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta01g01720
Enzymes [BR:
ota01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OT_ostta01g01720
Transcription machinery [BR:
ota03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
OT_ostta01g01720
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
OT_ostta01g01720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
9834927
NCBI-ProteinID:
XP_022838178
OrcAE:
OT_ostta01g01720
UniProt:
A0A090M3K2
LinkDB
All DBs
Position
1:265946..269838
Genome browser
AA seq
1184 aa
AA seq
DB search
MGVYDEDDVDMRVDGHEEDEEEEIGQEDAWVVISSFFEEKGLVRQQLDSFNEFIQHTMQE
IVDEMREMELTPEHQHLPGQDIEDMEKKTYKISFNQIYLSKPMVTEADGYTTTLFPKEAR
LRNLTYSAPLYVDMVKEITTVTPEGETTVEKEEIKKVFIGKVPIMLRSDYCSLHGHTDKE
LTELGECPYDEGGYFVINGSEKVLIAQERMSTNHVYVFEKKQPSKFMWQAECRSQPERGS
RGASSCVMRQMHAVGTKDAPGPIRCTLPYIRTDIPIFVVFRALGFVADKDILEHICYDLA
DNEMMEMLRPSIEEAFVIQSQEVALDFIGKRGSAVGVSREKRIKYAKEILQKELLPHVGV
REDCETKKAYFLGYMIHRLLLCSLGRRPEDDRDHYGNKRLDLGGPLLAQLFRQLFRKLTK
DVRLYCQRCIDSGKEIQLQLAIKAKTITQGLKYSLATGNWGSQGAQDIRAGVSQVLNRLS
YSSTLSHLRRINSPIGREGKLAKPRQLHNSLWGMICPAETPEGQAVGLVKNLALMALVSV
GSPSEPILEFLDEWTMENLEEISPSLIAESTKIFLNGVWVGVHRDPADLVRTLRKLRRQC
DVDSSVSVVHDIRLKELRLYTDYGRCTRPLFIVDDDQKLRIKKQHIELLTEKDVTGYSWN
ELVTSGFIEYVDTEEEETTMISMTIDDLAAARQSADRKTGVAIRYTHCEIHPSMILGICA
SIIPFPDHNQSPRNTYQSAMGKQAMGMYVTNYQIRMDTLGYVLFYPQKPLVTTRAMEYLH
FRELPAGCNAVVAIMCYTGYNQEDSVLMNQSAIDRGLFRSLYYRSFKDEEKKQGSLSREE
FERPDRDTCLGMRHGTYDKLDDDGLICPGTRVSGDDIIIGKTAPLPEDDSAVLSKRFSKK
DCSTGMKHAETGIIDQVLLTTNDQGLRFVKLRVRSMRTPQVGDKFSSRHGQKGTVGMTYT
QEDMPFTCEGITPDIIVNPHAIPSRMTIGQLVECIMGKVAACMGKEGDATPFTPVTAEDI
STMLHKCGYQKRGNEVMYNGHTGRMLDAQIFIGPTYYQRLKHMVDDKIHSRGRGPVQILT
RQPMEGRSRDGGLRFGEMERDCIMSHGAASFLKERLMDQSDAYRIHVCQKCGLIAVANLK
NQTFECCKNPSERTSVVQVMVPYACKLLFQELMSMAIAPRLITA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtctacgacgaagacgacgtcgacatgcgcgtcgacggtcacgaggaggacgag
gaggaggagatcggacaggaagacgcgtgggtggtcatcagctctttctttgaggagaag
ggcctggtgcgccagcagttggactcgttcaatgagttcatccagcacacgatgcaagaa
atagtcgatgagatgcgtgagatggaactcacgcccgagcatcagcacttgccgggacaa
gacatcgaggacatggagaagaagacgtacaagattagctttaaccagatttacctgagt
aaaccgatggtgaccgaggcggacgggtacacgacgacacttttccccaaggaagctcga
ttgcgtaacctcacgtactcagcgccactgtacgtggacatggtaaaggaaatcacgacc
gtgactccggagggcgaaacgacggtggagaaggaggagatcaagaaggtgttcatcggc
aaggtgccgattatgttgcgctccgactactgctcgctccacggtcacacggataaggag
ttgaccgagctcggagagtgcccgtacgatgaaggcggttacttcgtcatcaacggcagt
gagaaggttctcatcgcgcaagaaagaatgagcacaaaccacgtgtacgtgttcgagaag
aagcaaccgagcaaattcatgtggcaagcggaatgccgcagtcaaccagagcgtggctct
cgcggcgcgagttcgtgcgtaatgcgtcagatgcacgctgtgggtacgaaggacgcgccg
gggccaattcgatgcacgctgccgtacattcgaaccgacataccgatctttgtcgttttc
cgagctctcggtttcgtcgcggataaggacatcttggagcacatctgctacgatcttgcc
gacaatgaaatgatggaaatgcttcgaccatcgatcgaagaggcgttcgtgattcagtcg
caggaagttgcgcttgattttatcggtaagcgtggctccgcggtgggtgtgtcacgggaa
aagcgcatcaagtacgccaaggagattcttcaaaaggagcttctcccgcacgtaggcgtt
cgcgaagactgtgagacgaagaaagcgtactttttgggttacatgattcaccgtttgctg
ctgtgctcgctcggtcgacgtccggaggatgaccgcgatcactacgggaacaagcgtttg
gatctcggcggtccgctgctcgcgcaactcttccgacagcttttccgcaagctcacgaag
gatgtacgtctgtactgccagcgatgcatcgacagcggtaaagaaattcagctgcaactt
gcgatcaaggcgaagacgattactcaagggttgaaatattcgctcgcaaccgggaactgg
gggtcacaaggagctcaggatattcgggcaggtgtcagccaagtgctaaaccgcctctct
tactcctccacgctttcgcaccttcgtcgtattaactctccgattggtcgcgagggtaag
ttggcgaagccacgtcagttacacaactctctttggggtatgatttgtccggcggagact
cccgaaggtcaggctgtcgggttggtgaagaaccttgcgctaatggctcttgtttccgtc
ggctcgccgtccgaaccgattttggagttcttggacgagtggaccatggagaatctggaa
gaaatctcgccgtcactcattgccgagtccacgaagattttcctgaacggcgtctgggtt
ggtgttcaccgagatcctgccgacttggtgcgcaccctgcgtaagcttcgtcgtcagtgt
gatgtcgattcttcagtgagcgtcgtgcacgacattcggctgaaggagctccgattatac
accgactacggtagatgcacgcgcccgttgttcatcgtggacgacgatcaaaagcttcgc
atcaagaagcagcacattgagttgctcaccgagaaggacgtcaccggttactcgtggaat
gaactcgtcacgtctggcttcatcgaatatgtcgacactgaagaagaggaaacgactatg
atttccatgacaatcgatgatcttgccgcggctcgtcaaagtgcggacaggaagacaggc
gtcgccatcaggtacacgcactgcgagatccacccgtcgatgattttgggcatttgtgcc
tccatcattccgttcccagatcacaaccagtctccacgtaacacttaccagagcgctatg
ggtaagcaagcgatgggcatgtacgtcacgaactaccaaattcgcatggatacgctgggt
tacgtccttttctacccgcaaaagccgctggttaccacgcgcgccatggagtacttgcac
ttccgcgaactccccgctggttgcaatgcggtggtcgccatcatgtgctacaccggttac
aaccaagaagattcagtgctcatgaaccagagcgcaatcgatcgcggtttgttccgttcg
ttgtactacagatcattcaaggatgaggagaaaaagcaaggcagcctgagccgcgaagag
tttgagagacccgatagagacacgtgcttgggtatgcgccatggcacttacgacaagctt
gatgacgatggtttgatctgtcccggcacacgcgtcagcggcgatgatattatcatcggt
aaaaccgcaccgcttcctgaagacgactcggcagtgctctcgaagcgcttctccaagaag
gattgctccacgggcatgaagcacgctgagactggtataatcgatcaagtattgctcacg
acgaacgatcaaggcttgcgcttcgtgaaacttcgagttcgatcgatgcgaacaccgcaa
gttggtgataagttttcatccagacacggtcagaagggtaccgtcggtatgacgtacacg
caagaagatatgcctttcacgtgcgagggtatcacgccagacataattgtcaacccgcac
gccattccttcgcggatgactatcggtcagctcgtggagtgtatcatgggtaaggtcgcg
gcgtgcatgggcaaggaaggggacgccacacccttcacgcctgtgaccgcggaagacatc
tcgacgatgctccacaagtgcggttaccagaagcgcggcaacgaagtcatgtacaacggc
cacaccggtcgcatgttggacgcacaaatcttcatcggtcctacgtactatcagcgtctg
aagcacatggtcgacgacaagattcactctcgcggccgcggtcctgtacaaatcttgacg
cgtcaaccaatggagggtcgatcgagagacggtggtttgcgtttcggagaaatggaacgc
gattgtatcatgagtcacggtgccgcctcgttcctgaaggaacgtctgatggaccagtcc
gatgcgtacagaatccacgtctgccagaagtgtggtttgatcgctgtcgccaacttgaag
aaccaaacgttcgagtgttgcaagaacccgagcgagcgcacgtccgtcgtccaggtcatg
gtaccgtatgcgtgcaaacttttattccaagagctgatgagcatggccatcgctccgaga
cttatcacggcgtga
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integrated database retrieval system
