Ostreococcus tauri: OT_ostta01g01830
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Entry
OT_ostta01g01830 CDS
T01358
Name
(RefSeq) Clathrin, heavy chain/VPS, 7-fold repeat
KO
K04646
clathrin heavy chain
Organism
ota
Ostreococcus tauri
Pathway
ota04142
Lysosome
ota04144
Endocytosis
ota05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
OT_ostta01g01830
04142 Lysosome
OT_ostta01g01830
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
OT_ostta01g01830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ota04131
]
OT_ostta01g01830
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ota04147
]
OT_ostta01g01830
Membrane trafficking [BR:
ota04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
OT_ostta01g01830
Exosome [BR:
ota04147
]
Exosomal proteins
Proteins found in most exosomes
OT_ostta01g01830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_Vps41
TPR_PEP5_VPS11
Motif
Other DBs
NCBI-GeneID:
9834933
NCBI-ProteinID:
XP_022838184
OrcAE:
OT_ostta01g01830
LinkDB
All DBs
Position
1:284484..289766
Genome browser
AA seq
1694 aa
AA seq
DB search
MAHATPVSVREAVQLKTCGVNPQCISFTNLTMESDKYICVRESGATNNVVIVEVANPLTP
MKKPITADSALMNPKQNIIALKARVENENGVEDSLQIFNIDQKAKIKGHDMEPVVFWKWI
TPTMLGIVTNTSVFHWSIEDQNAPVKVFDRTANLSGSQIISYKASEDMQWFTLIGIAQGD
ASRPALVKGNMQLYSVAQQRSQALEAHMASFATHQVPGNAKKSQLVVFAQKMVQADGSIA
SKLHVIELGAPAGQTPFTKRSSELFFPPEFADDFPVVMHASDKYGVVYIVTKSGLLFVYD
LETASPVYRTRISQEPVFIGAAAPSVGGLYIVNRGGQVLLATLNEAAVVPFVSGQLNNLE
LALSLASRGNLPGADALVMPKFDMLFNAADYKGAAELAASMSTLRNEQTIARFRNVPTQP
GQSSPLLQYFGACLQRGNLNKLESVELAKLVLAQNKKQLLDTWLSEDKLEASEELGDLIS
PTDSETALKIYVKARANPKVTAAFAGRGEFDKMAQYCAAVGYKPDYMYMLQSLMMSNPPG
AVQLAQQMSQMTPPPVDMGNIADLFLQRNMIREATSILLDLLKEDDPEQASLQTKVLEIN
LVTYPNVADAIMAQGKLTHYDKPRIAQLCEKAGLYVRAMEHYSELVDLKRCVVNTHSMDP
QALTEFFGTLSREWALECLQELLKINIRQNLQIAVNIAKEYTEQLEIQSVVKMFDKFESH
EGLFYYLGYFVNTCEDKEVVYKFIEAASKIGQIKEVERVTRESDHYDPERVKVFLMEAKL
ADARPLINVCDRHEFVGDLTTYLYNNNMLRYIEGYVQKVNPKQAPKVVGTLLDLECPDDF
IKTLILSVRSLLPVAPLVEEVEKRNRLKILTQFLEHLVNEGSIDPQVHNAMGKMLIDSNQ
NPEHFLLTNEYYESAVVGRYCERRDPYLACVAYKRGKCDDELVDCTNRNSMFKVQARYVV
ERMEPELWAKVLTNDNKFCRQFIDQVVSTALPESKNPEQVSVTVKAFMTAEMPHELIELL
EKIVLQNSAFSNNPNLQNLLILTAIKADATRVMDYVNRLDAFNGPEVAEIAAGNELYEEA
FAIYKKFDLHVDAMKILLESLEDIERGIEYARKVELPEVWYQLGKAQLKMGTPEAVKEAI
KSYIKAQDGSDFIDVIHAARHADMYVDMVPYLLMVRKTKKEARIDTELVYAYAKINDLAR
LEDFLTSPNSANQQSVADRCFSEGLYEAARLLFTALSNWACLTSTLLKLRMFQSAVDAAK
KANSPKTWKEVCFTCVDEGENKLAQLAGLHIVIQADELDSVSEFYQARGKFTELIALMEA
GVGVDRAHMGIFTELGILYANHASEKLMEHIRLFSARINIPRLITTCTNVALWPELAYLY
RCYDEYDNACEVMMEHPDAWEHVVFKDVCVKLANADLYYKAIKFYIREHPTEMTNLLGVL
QSRLDHSRVVALMRKEGKLPMVKEYLLSVQGANLTAVNDAVNELAIEEEDHVALKASIDM
YDNCDQLSLAIQCESHELIEFRRISSYIYQRNSRWKQAIELSKRDGLLKDAMEIAAKSND
SSIVDELLEFFIETGNKECFSAALCTCYDLLKPDEVMQKAWLHGLSDWVMPFMIQVMRDM
NSKIDILMKDKADRNEEKVNEEKERVAAEMNSNLYAQLMPAALPAYEGQGAGGYAPQQGF
AQQYAYPPQQQQGW
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgcgacgccggtgagcgtgcgggaggcggtgcagcttaaaacgtgtggggtg
aatccgcaatgcatctcgttcaccaatctcaccatggagagcgacaagtacatctgcgtg
agagaaagcggggcgacgaataacgtggtgatcgtcgaggtggcgaacccgctgacgccg
atgaagaagccgatcacggcggacagcgcgctgatgaacccaaagcagaacatcatcgcg
ttaaaagcgcgagtggagaatgaaaatggggtggaggattcgctgcagattttcaacatt
gatcaaaaggcgaagatcaaggggcacgacatggaaccggttgtgttctggaagtggatc
acgccgacgatgctggggattgtgaccaacacctctgtgtttcactggtcgatcgaagat
cagaacgcaccggtgaaggtgttcgatagaacggcgaacctgagcgggagccagatcatc
agttacaaggcatcggaggacatgcagtggttcaccttgattggcatcgcgcagggcgat
gcgtcgagaccggcgttggtcaagggtaacatgcagctgtattccgtcgcgcaacagcgc
tcgcaggcgctcgaggcgcacatggcctcgttcgcgacacaccaggtgccgggcaacgcg
aaaaagagccagttggtggttttcgcacaaaagatggttcaagccgacggatctattgcg
tccaaactgcacgtcatcgagcttggcgctccggcaggacaaacacccttcacgaaacgc
tcgagcgagctgttcttccctccagaatttgctgacgacttccctgtcgtcatgcacgca
agcgacaagtacggcgtcgtgtacatcgtcaccaagagcggtttgctgttcgtgtacgat
ttggaaacggcatcgccggtgtatcgtacgcgcatttcgcaagagcccgtcttcatcggt
gccgcggcgccgagcgttggtggcttgtacatcgtgaatagaggtggacaagtcctgttg
gcaactctgaacgaagccgccgttgttccattcgtcagcggtcaactcaacaacttagag
ctcgcgctttctctagcatcgcggggtaacctccccggtgccgatgcgctcgttatgcct
aagtttgacatgctcttcaacgccgctgactacaagggtgcagccgagctcgccgcgagc
atgagcaccttgagaaatgaacaaacaatcgcgcgcttccgcaacgtgccgacgcaacca
ggtcaaagctcgccgctgctccaatactttggtgcgtgcttgcaacgcggcaatttgaac
aagttagagtccgttgaacttgccaagcttgtgctcgcgcagaacaagaagcaacttctc
gatacctggctcagcgaagacaagctcgaagcgagcgaggagctcggcgatttgatctct
ccgacggactctgagaccgcgctcaagatttatgtcaaggcgcgcgcaaacccgaaagtc
accgcggcgttcgcgggacggggtgagttcgataagatggcgcaatattgcgccgcggtc
ggttacaaacccgactacatgtacatgctgcagtctttgatgatgagcaacccgccaggt
gcggtgcaactcgctcagcaaatgagtcagatgacgccgccgccggtcgatatgggtaac
atcgcagacttgttcttgcaacgcaatatgatccgcgaggccacgtcgatcctgctcgat
ttgctcaaggaggatgatccggagcaggcgtcgcttcagacaaaggtactcgaaatcaac
ttggtcacatatccgaacgtggctgacgcaatcatggcgcaaggcaagctcacgcattac
gataagccacgcatcgcgcagctctgcgaaaaggctggcctttacgttcgtgcgatggag
cactattcagagttagtggatttgaagcgatgcgttgtgaacacgcactccatggatcct
caggcgctgactgagttttttggaacgttgagccgcgagtgggctcttgagtgcctccaa
gagctcctgaagatcaacatacgccaaaacctgcaaatcgcggtaaatatcgccaaggaa
tataccgaacaactcgaaatacaatcggtcgtgaagatgtttgacaagttcgaatctcat
gaaggtttgttctactatctcggctacttcgtcaacacgtgcgaggataaggaagtggtg
tacaagttcatcgaagcggcgtccaagattggccaaattaaggaagttgagcgcgttacg
cgcgaaagcgatcactatgatccagagcgtgttaaggttttcctcatggaggctaagctt
gcggacgccaggccgctcatcaacgtctgcgatcgacacgagttcgtgggcgatttgacg
acctacctttacaacaacaacatgctgcgttatatcgaaggctacgtacaaaaggtgaac
ccgaagcaggcgccgaaggttgttggtacgctcttggatctcgagtgcccggatgacttc
atcaagacgctcattctctccgtgcgttccttgttgccggtggcgcctctcgtcgaagag
gtcgaaaaacgcaacagactcaagattctgacgcaattcctcgagcacttggtgaacgag
ggaagcattgatccgcaagtccacaacgccatgggtaagatgctgatcgacagcaatcaa
aacccggagcacttcttgcttactaatgagtactatgagtctgccgtcgttggccgatac
tgcgaacgccgcgacccatacttggcttgtgtcgcgtacaagcgaggcaagtgtgatgac
gagctggttgattgcacgaacagaaacagcatgttcaaggtgcaagcgagatacgtcgtc
gagcgcatggagcccgagctttgggcgaaggtgttgacgaatgataacaagttctgccgc
caatttatcgaccaagtggtgtccacagcgctgccagagagcaagaatcccgagcaagtg
tccgtcactgtcaaggctttcatgacggctgagatgccgcatgagctcatcgagttattg
gagaagattgtgctgcaaaacagcgcgttcagcaacaacccgaacttgcagaacttgctc
atcctcaccgccatcaaggcagatgctacgcgcgtgatggactacgtcaaccgcctcgac
gccttcaacgggcctgaggtcgcggaaatcgccgcgggtaacgaactctacgaagaggcg
tttgccatctacaagaagttcgatcttcacgtcgatgcaatgaagattcttctcgagtct
ctcgaagacattgaacgaggcattgagtacgctcgcaaggttgagctcccagaggtgtgg
taccagctcggcaaggcgcagctcaagatgggcacgccggaagcggtcaaggaagccatc
aagtcatacattaaagcacaagatggcagcgacttcatcgacgtcatccatgcggcacga
catgcggatatgtacgtagacatggttccgtatttgctcatggttcgcaagacgaagaag
gaagcgcgcatcgacacggagcttgtctatgcgtacgcgaagatcaacgacttggccagg
ctcgaggattttctcacctccccaaacagtgccaaccaacaatcggtggctgatagatgc
ttctccgaaggtctgtatgaagccgcgcgtctgctattcacagcgctcagcaattgggcc
tgcctgacgagcactttgctcaaacttcgcatgttccaaagtgcggtcgacgctgctaag
aaagcgaattctccaaagacgtggaaggaagtgtgtttcacgtgcgttgacgagggtgag
aacaagctcgcgcagcttgcaggtcttcatatcgtcatccaagccgatgagctcgactcc
gtcagtgagttttaccaggctcgaggtaagttcacagaactcatcgcgctcatggaagct
ggcgtcggtgttgacagagcgcacatgggtatcttcaccgagctcggcattctttacgcg
aaccacgcgtctgagaagctcatggagcacatccgtttgttcagcgcgcgtatcaacatt
ccgcgtctcatcacaacctgcaccaacgttgccttgtggccggaactcgcgtacctgtac
agatgctacgacgagtatgataacgcctgtgaagtgatgatggagcatccggacgcgtgg
gagcacgtcgtcttcaaggatgtgtgcgtcaaactcgcgaacgcagacttgtactacaag
gcgatcaagttctacattcgcgagcacccgacagagatgaccaaccttctaggcgtactt
cagtctagactcgatcactctcgagtggtggcgttgatgcgtaaggaaggcaagttaccc
atggtgaaggagtatctgttgtcggttcaaggcgccaatttgactgcggtgaacgacgcg
gtgaatgagcttgcaattgaggaagaggaccatgtcgcgctcaaggcgtcgatcgacatg
tacgataactgcgatcaactctcgctcgcgattcagtgcgaatcacacgagctgatcgag
tttcgaagaatttcttcgtacatttaccaacgtaactctcgatggaagcaagccatcgag
cttagcaagcgcgacggtttgctcaaggatgcgatggaaatcgccgcaaagagcaacgac
tcaagcatcgtcgacgagcttctcgagttcttcatcgagacgggcaacaaagagtgcttc
tctgccgccctatgcacgtgctacgacttgttgaagccggacgaggtcatgcaaaaggcg
tggttgcacggccttagcgattgggtgatgccgttcatgattcaagtcatgcgagacatg
aactcaaagattgacatcttgatgaaggacaaggcggatcgcaacgaggagaaagtgaac
gaggagaaggaacgtgtcgctgcggagatgaatagcaacctatacgcgcagctcatgcct
gcggcgttgcctgcgtatgaaggccaaggtgcgggcgggtacgctccccaacaaggcttc
gcccaacagtatgcctacccgccacaacagcagcaagggtggtaa
DBGET
integrated database retrieval system
