Ostreococcus tauri: OT_ostta01g02520
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Entry
OT_ostta01g02520 CDS
T01358
Name
(RefSeq) Beta-lactamase-like
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
ota
Ostreococcus tauri
Pathway
ota03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
OT_ostta01g02520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta01g02520
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
OT_ostta01g02520
U7-dependent histone pre-mRNA processing factors
OT_ostta01g02520
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
9834855
NCBI-ProteinID:
XP_022838212
OrcAE:
OT_ostta01g02520
UniProt:
A0A090N2Q4
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Position
1:387659..390165
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AA seq
800 aa
AA seq
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MTELALVLDGEAPVRKKEVERGNKVLVTPLYGVRGERAMCYHVSIDGCNILLDCGWTDAF
DVEMLKPLEAIAKDVDAVLISHPDTAHLGALPYAFGKLGMNCKVYATLPVHKMGQMYMYD
HFLTRQDQEDFQETFSLDDVDKAFAAFVPVKYQQLSMLRGKGEGISVMAYAAGHTLGGAM
WKIGKDAEDIIYAVDYNVRKERHLNGATFDSIHRPALLITDASSVEREVPKSTVPRDTKL
VDTILSSLRMNGNVLIPIDPAGRVLELILLLEEKWQQRQLGSYQIVLLTNVAYNTLDFAK
SHLEWMGDLVTSAFERRRENPFNTKFITICHTMDELKALPPGPKVVLASFGSLEAGPARH
LFAEWAGDKSNLVVLTGQPEEGSLMEEVVRVSSKPAAKKNVKFTLSRRVPLEGEELATHE
STRKADKSKKEEEKKPEHVSVEEEMVDIKPVEPDEPEPMDVLFGVTTVGSTAEADLRRRE
TLTEGFTPIMTQHGPMFADEVWDPVMTDYGQEIDIELFMRTSQQASGRMVPELAKEPSTM
FEDPSVEMIEEQQLVEAAQEAEEDEEIPTKLVSEAVEVSVKATILTIDFEGKADGQSVRT
LIEQAAPRQIVLVHGNAKETKLLKDQLVLTLPGVDIYTPNAGKTVECTSSMATYKIRLSD
ALFQKAKMRDMSGYRVGWVNGIVGKALEEGGAPMLLPMSTLSTKADAGALVTTTSNEMAI
MKRAAAQPGSVFLGDLRLVDFRQALAQEGITAEFSGGVLVCADGRVTIRKDSDEKLVIEG
ALSQDFFEIRQILYSQYQIL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgacggagctcgcgctcgtcctcgacggcgaggcgccggtgcggaagaaggaggtggag
cgagggaataaggtgctggtgaccccgctgtacggcgtgcgaggcgagcgagcgatgtgt
tatcacgtctctatcgatggatgtaacattttgctcgattgtgggtggacggatgcgttc
gacgtggagatgttgaagccgctcgaggcgatcgcgaaggacgtggacgcggtgttgatc
tcgcaccccgataccgcgcatctcggggcgctaccgtacgcgttcgggaaacttgggatg
aattgtaaggtgtacgcgacgttaccggtgcacaagatgggacagatgtacatgtacgat
cattttttgaccaggcaggatcaggaggactttcaggagacgttctcgctggacgacgtc
gacaaggcgttcgcggcgttcgtaccggtgaagtatcagcagttgtcgatgctcagggga
aaaggggaggggatttccgtcatggcgtacgcggcgggtcacaccctaggcggggcgatg
tggaagattgggaaggatgccgaggacatcatctacgcggtggactacaacgttcgcaag
gagagacatttgaacggcgctacgtttgattccattcatcgtcccgcgcttcttatcacc
gatgcgagtagtgtcgagcgtgaggtaccgaaatccaccgttcccagggacacgaagctg
gtggatacaattttgtcgagccttcgcatgaatggtaacgtgttgatcccaatcgatccc
gccggacgtgtgctcgagttgatcttgctcctcgaggagaagtggcaacagcgtcagctt
ggatcgtatcaaatcgtattgttgacgaatgtggcgtacaacacgcttgatttcgctaaa
tctcacttagaatggatgggtgatctcgtgacgagcgcgttcgagcgtcgacgcgagaat
ccgttcaacacaaaattcattacgatttgccataccatggacgagttgaaagctttaccg
cctggaccaaaggtcgtgctcgcatcgttcggcagcttagaagccggacccgcgcggcac
ctgttcgccgaatgggccggtgacaagagcaacttggtggtgctcactggacaacccgag
gagggatcgcttatggaggaagttgtgcgagtcagctcgaaacctgcggcgaagaagaat
gtgaaatttactctttcgcgccgcgtacctttagaaggagaagagctggcaacacatgag
agtactcgcaaagccgacaagtcaaagaaagaggaggagaagaagcccgagcatgtgtct
gtggaagaagagatggtagatatcaaacccgtggaaccggatgaacctgaaccgatggat
gtgcttttcggtgtcactacggttggatccacggccgaggctgacttgcgacgccgggaa
actttgacagagggtttcacgccaataatgacgcagcacggccccatgttcgccgatgaa
gtgtgggatcccgtgatgacggattacggtcaagagattgacatcgaattgttcatgcga
acatcgcaacaagcgagcggacgaatggtgcctgagctcgcgaaggaaccttcgacgatg
ttcgaggatccaagcgtggaaatgatcgaagagcaacagctcgtcgaagctgcgcaagag
gcggaagaggatgaagaaatcccgacgaaacttgtgtcagaagcagttgaagtgagcgtc
aaggcaactattctgacgatcgactttgaaggtaaagccgatggtcagagcgtccgcacg
ctcatcgaacaagcggcgccgagacaaatcgtgctcgttcatggtaacgcgaaagagacg
aaactgttgaaagaccaactcgttttgactctgcccggtgtagatatttacactccgaat
gcgggtaagacagtcgagtgcacgtcttccatggcgacatacaagatccgtctgtcagac
gcgcttttccaaaaggcgaagatgcgagatatgtctggatacagggtgggttgggtcaac
ggcatcgtcggtaaggctttggaagaagggggtgccccgatgttgcttccgatgtcaact
ctgagcaccaaggcagacgcaggagcactcgtgacgacgacgtcaaacgaaatggcgatt
atgaagagagccgcggctcaacctggttctgtgtttttgggagatcttcgactcgttgat
tttcgtcaggctttggcgcaagaggggatcaccgctgagttctccggtggtgttttggtt
tgcgctgatggtcgtgtcaccatcagaaaagacagtgacgaaaagcttgtcatcgagggc
gctttgtcacaggacttcttcgaaatccgacagatattgtacagccagtatcaaattctc
taa
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