KEGG   Ostreococcus tauri: OT_ostta01g02680
Entry
OT_ostta01g02680  CDS       T01358                                 
Name
(RefSeq) Pre-mRNA splicing factor PRP21-like protein
  KO
K12825  splicing factor 3A subunit 1
Organism
ota  Ostreococcus tauri
Pathway
ota03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OT_ostta01g02680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ota03041]
    OT_ostta01g02680
Spliceosome [BR:ota03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    OT_ostta01g02680
 Complex B
    OT_ostta01g02680
 Complex C
   U2 SnRNP specific factors
    OT_ostta01g02680
SSDB
Motif
Pfam: PRP21_like_P Surp HsdM_N
Other DBs
NCBI-GeneID: 9834965
NCBI-ProteinID: XP_003074330
OrcAE: OT_ostta01g02680
LinkDB
Position
1:complement(419528..421081)
AA seq 518 aa
MSPAPLETALALSVALIRARATATMELATSTVDTGIGDRSVKVDGARGVELETRTQSVGV
IIPPPDVRVIVDKTAQFVGKNGPEFEQRILASEKNNVKFNFLTAGDPYHAYYRQQVAEAK
AQASGAAVPAKETEPAKEQQVVVKPSTGDAKPVILEPPKADEFTIPIPAGISAVDLDVIK
ITAQFAARNGKKFVTALATKEAANPQFNFLRPNHSMFTFFTALADAYEKILSPTSELLER
LEKGCDKRVLLERVLKRLDWETAQKKAKQDKEDAEEEERIQMALIDWHSFVVVETLDFED
AEDRDLPPPMKLNEVIEAMRKRELEAPIEEEVVNEEAPRVMVTMDEEERDMVRQAAEPHS
NPEPPIVENVGSMKIVRNYKKPEERKAAAQAIDSTKFVVSPITGEMVPLDDMAEHMRISL
LDPKWKVQREAMLAKLQGSTQASHEDVAANVLNLAQNRPDIFGSSDSEVSNAINAELMKR
RPVVAPASAPKSSITPPLMAAAPVPTRAPPPPPKVVPP
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgtcgcccgcgccgctcgaaactgcgctcgcgctttcggtggcgctcatacgcgcgcgc
gcgacggcgacgatggagctcgcgacgtccacggtggacaccgggatcggtgatcgaagc
gttaaggtcgatggtgctcgcggagtcgagctcgagacccggacgcagagcgtgggcgtg
ataatcccgccgccggacgtgcgagtgatcgtggacaagacggcgcaattcgtcgggaag
aacggaccggagttcgagcaaagaatcttagcgtcggagaagaacaacgtcaagttcaat
tttttaaccgcgggggatccgtatcacgcgtattatagacagcaagtggccgaagccaag
gcgcaggcgagcggcgcggcggtgccggcaaaggagacagagcctgcaaaggaacagcaa
gtcgtggtgaaaccgagcacgggcgacgccaagccggtgatactggagccacccaaagcg
gatgagttcaccattccgatcccggcgggaatttccgcggtggacttggatgtgatcaaa
atcaccgcgcaatttgcggcgcgaaacgggaaaaagtttgtcacggcgttggccacaaaa
gaggcagcaaatccgcaattcaacttcttgaggcccaatcactcgatgttcaccttcttc
acggctctcgcggacgcgtacgagaagattttgagcccaaccagtgaacttttagagcgt
ttggagaagggctgtgacaagagggtcctgctggagcgcgtgttgaagagacttgactgg
gagacggcgcaaaagaaagcaaagcaggacaaggaagacgccgaagaggaggagcggatc
cagatggcactcatcgattggcatagtttcgtcgttgtggagacgttggacttcgaagac
gcggaagatcgtgacctgccacctccaatgaaactgaatgaggtcattgaggcgatgaga
aaacgagagcttgaggcgccaatcgaagaggaagttgtaaatgaagaagctccaagggtg
atggtgactatggatgaagaagagcgagacatggtccgccaagctgcggagccgcattcg
aatccagaaccacccatcgtcgagaatgtgggctcaatgaaaattgtgcggaactacaaa
aagccagaggagcgcaaagcggcagcacaagctatcgactcaacgaaattcgttgtttca
ccgatcacaggagagatggtgccactcgacgacatggcggagcatatgcgtatttctttg
cttgatcctaaatggaaggttcaaagagaggcaatgttggcaaagcttcagggaagcaca
caggcgtctcatgaagatgttgcagcaaacgtccttaacttggcgcaaaaccgacccgac
atcttcggttcctccgattccgaagtatcaaacgccatcaatgcagagttgatgaaaaga
cgaccagttgttgcgcccgcaagcgcgccgaagtcgtccatcacgcctccgctgatggct
gctgcgcctgttccgacccgagcacccccgccaccgccgaaggttgtgccacca

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