KEGG   Ostreococcus tauri: OT_ostta01g03580
Entry
OT_ostta01g03580  CDS       T01358                                 
Name
(RefSeq) Nucleotide-binding, alpha-beta plait
  KO
K12842  U2-associated protein SR140
Organism
ota  Ostreococcus tauri
Pathway
ota03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OT_ostta01g03580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ota03041]
    OT_ostta01g03580
Spliceosome [BR:ota03041]
 Complex A
  U2 snRNP components
   U2 related factors
    OT_ostta01g03580
 Complex B
    OT_ostta01g03580
SSDB
Motif
Pfam: Surp RRM_1 RRM_7 RBD_DEAH11 SET_assoc
Other DBs
NCBI-GeneID: 9834687
NCBI-ProteinID: XP_003074412
OrcAE: OT_ostta01g03580
LinkDB
Position
1:<568978..>570207
AA seq 410 aa
MRFALDPDRAKRRNKPSTTSRRAVERTKRAERAERDAEEAEKVLRDFEHEFGDDDAKRAR
EDGDDDDARAVRIDAATKRARVMDVMLEEFVANDERRHELARERACEDSATARAGGRDTS
EGTLDRTTNIRVHGLPRDVDELSLARSFERFGGIASVKIWQPREGEIESGTTGGYVCFMS
RTSAERAVREMRGATVLGSVVDVEEAKAMRLPERASWPTNESEAKAAELLSRAAAKTIRE
APRQQPAATSSAYGAPDVIVRVPEDDELRRRIDVTAAYVAEDGVPFERALKARELQNEDF
RFLFDASSDASVYYRWRVFAFAQGDGWTSWRIDPFIMFRGGARWIPPSTSESAMKRSGTK
LSPEDRKSLEEILRHVTTSRDDVRDAMEFAVERAECAGDVVDVIASSLIE
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgcgcttcgccctcgaccccgaccgcgcgaaacgtcgaaataaaccgtcaacgacgtcc
agacgcgcggtggagcgcacgaagcgcgccgaacgcgccgagcgagacgccgaagaagct
gaaaaagttcttcgtgactttgagcacgaattcggtgacgacgacgcgaaacgtgcgcga
gaggacggcgatgacgatgacgcgcgcgcggtgcgtattgatgccgcgacgaagcgagcg
cgggtgatggacgtaatgctcgaggagttcgtggcgaacgacgagcgacgacacgagttg
gcgcgcgagcgcgcgtgcgaggactcggcgacggcgcgtgcgggcgggagagacacatca
gagggaacgttggatcgcacgacaaacattcgcgtgcacggattaccgcgagacgtggat
gagctgtcgctcgcgcggtcgttcgagcggttcggcggcatcgcgagcgtgaaaatttgg
cagccgcgagagggtgagatcgagagcgggacgacgggtgggtacgtgtgcttcatgtcg
aggacgagtgcggagcgagcggtgcgagagatgcgaggggcaacggttttggggagcgtg
gttgacgtagaggaggccaaggcgatgcgtctgcccgagcgcgcttcgtggcccacgaac
gagagtgaagccaaagccgcggagcttctgtcaagggcggccgcgaaaacgatcagggag
gcgccacgtcaacagccagcggcgacaagctcggcgtacggtgcgcccgacgtgatcgtt
cgcgtaccagaggacgacgaacttcggaggcgcatcgacgtcaccgctgcgtacgtcgct
gaagacggcgtgccgttcgagcgagcgctcaaggctcgagagttgcaaaacgaggacttt
cgttttctatttgatgcgtcatcggatgcgagcgtgtactacagatggcgcgtcttcgca
ttcgcccagggtgacggatggacgtcgtggcgcatcgacccgttcatcatgtttcgaggc
ggagcgcgttggataccaccatcaacatccgagagtgcgatgaagcgctctgggaccaag
ctctcgccggaagatcgcaaaagtctcgaagagatcttgcgccacgtcaccacatctcga
gatgacgtacgcgacgcgatggagtttgcggtggagcgagccgagtgcgctggggacgtc
gtggacgtcatcgcgtcctccctcatcgaa

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