Ostreococcus tauri: OT_ostta01g03630
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Entry
OT_ostta01g03630 CDS
T01358
Name
(RefSeq) Nucleoporin FG repeat
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ota
Ostreococcus tauri
Pathway
ota03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OT_ostta01g03630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta01g03630
03036 Chromosome and associated proteins [BR:
ota03036
]
OT_ostta01g03630
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
OT_ostta01g03630
Chromosome and associated proteins [BR:
ota03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
OT_ostta01g03630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
Nucleoporin2
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
9834799
NCBI-ProteinID:
XP_022838258
OrcAE:
OT_ostta01g03630
UniProt:
A0A090LY39
LinkDB
All DBs
Position
1:577938..580955
Genome browser
AA seq
1005 aa
AA seq
DB search
MAFGGFGGFGGQQTPSPFGGGAPTSAFGGQQASHAGASGGFGTAGGGFGAGGSSAFGGSQ
STQSASPVANACKFWNKGSCKFGARCNNKHVCSKCGSTAHRAVSCSMTPGATGYRATRVV
DKELLTPGTTYAMVHSISAMPENLAKSAEEIRAEAYANADQPATSGFGGSPAPGAFGAPA
STGAFGAPASSGFGAPSSTGFGASPSAASPFGAPATGGAFGATPNAFGGASTPSAFGGAS
TTGGFGASAGGGFGASAASASPFGGASATPSAFGAPASTATGGGLFGAGSSTPGGFGAGA
STPSVFGAPATPSAFGAAPASSAFGAPAAAASPFGAPAASTPSAFGAAPNAFGAAPTPSA
FGAAPTSTLGAFGATPAPSPFGAAQTPGAFGATPAASPFGAPASSASGGLFGSSAPASGG
GLFGSSAPATSGFGASTPALGGFGAPKPAGGLFGAPATPATGGGLFGAPATTPSLGGTTP
GFGAAPAAGGGLFGSTATPSTGAGGLFGASSPSTGAGGLFGAAPGAATPAFGGFGAANAT
PAFGQSSAASGGLFGASTAASAPSGGLFGAAQTTATGGGLFGASAPTSGGGLFGAPKPAT
GGLFGSAPSTGAAPAGGLFGASAPAAGGSLFGATAPSTGGGLFGASAPAAGGGLFGASAP
AAGGSIFGGGLGATQPNAGALVSLGGQPAVATTPYGSPLQPPSLQLATTEQLPAKRSLLG
TMQSPSAGAAATAFPVRSLTPRSPWLTSRGGLSRDPKPRGSVSALTPTSAVKAVSTPTSA
VRPGSSVSVATPSSGGWLFKPRENPRALFIRPEGASPLPAPSVALAVSPQREAHSPENRQ
VHFADDKENTPKKSGANAIDAIMPKLTGKGYSMNPTVEQMERMFERNGDAALAAIDNFSV
SNEAYGRVKWLEPVDVRGLDLDKIVSFEQACLCLYPEDQDIEPPEEGQGLKKRAEVTLYG
ILPKKSGADAKEKYREKIAKQTEKAGAELVEYNADTGIWKFILQL
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcggtgggttcggggggttcggtggacaacagaccccgtccccgttcggtggc
ggcgcgccgacgtcggcgttcgggggacaacaggcctcgcacgcgggcgcgagcggtgga
ttcgggacggcgggcggtggattcggcgccggtgggtccagcgcgttcggtgggtcgcag
tcgacgcagagcgcgagtccggtggcgaatgcgtgtaagttttggaacaaagggagctgt
aagtttggcgcgcggtgtaacaacaagcacgtgtgctccaagtgcggatcgacggcgcat
cgggcggtgagctgttcgatgacccctggggcgacggggtatcgcgcgacgcgagtcgtg
gataaggaattgttgacgccggggacgacgtacgcgatggtgcactcgatcagcgcgatg
ccggagaatttggcgaagagcgcggaggagattcgagccgaggcgtacgcgaacgccgat
cagccagcgacgagcgggttcggcgggtcgcccgcaccgggggcgttcggggcgccagcg
tcgactggagcgtttggtgcgccggcgtcgagtggattcggggcgccgagttcgactggg
ttcggggcgagcccgagcgcagcgtcgccgtttggcgcgccggcgaccgggggtgccttc
ggagcgacgccgaacgctttcggcggtgcatccacgccgagcgctttcggtggggcgtct
acgaccggtggattcggtgcgtcagcgggcggtggtttcggggcgtcagcggcgtcggcg
agtccgttcgggggggcgtcggcgacgccgagcgcgttcggcgcgccagcttcaaccgcc
acaggtggagggttgttcggtgccggatcttcgacgcccggtgggttcggtgcaggcgcc
tcgacgccgagcgtgttcggtgcccccgcaacgccgagcgctttcggcgctgcaccggct
tcgagcgcgtttggcgctccggctgcggcagcaagtccgttcggcgccccggcggcatcg
acgccgagcgctttcggcgccgcgccgaacgcgtttggtgctgcgccgacaccgagcgca
tttggtgccgcaccaacgtcgacgcttggcgcttttggagccactcccgctccgagtccg
ttcggcgcagcgcagacgccaggcgcctttggggctactccggctgcgagtccgttcggt
gcgcccgcgtcctctgccagtggtggcttgttcggttcgtcggcgcctgcttcgggaggt
ggcctgttcggttcgtcggcgccagcgacgtccggattcggagcttcgacgcccgcttta
ggcggttttggcgcgcccaagcccgccggcggtttgttcggagcgccagctactccggca
acaggcggaggtttgttcggggctcccgcgacgacacctagcttgggggggaccactcct
ggatttggcgccgctcccgctgcgggcggtggtctgtttggatccactgcaacgccgtcc
acgggcgcgggtggtttattcggcgcctcgtcgccgtccacgggtgcgggcggattgttt
ggagcagctccaggcgcagccacgcccgcgttcggcggttttggcgcggctaatgccacg
cccgcgtttggtcaatcttctgcggcctctggcggtctcttcggtgcttccaccgcggct
tctgctccgtctggtggactcttcggcgccgctcagacgacggcgacgggcggcggcttg
tttggcgcctccgcacccacatctggtggtggtttgttcggtgcaccgaagccagcgacc
ggagggttgttcggatctgcaccttcgaccggcgctgcgcctgctggaggactttttggc
gcttccgcgcccgcggcgggcggtagtctatttggtgcgaccgctccgtcgacaggtggc
ggactttttggcgcctccgctcccgcggcgggtggtggcctgttcggcgcttctgcaccc
gcagctgggggtagtatttttggcggcggtttaggtgccacgcaaccgaacgcaggcgct
ctcgtttctctcggcggtcagccagctgtggcgacgacgccgtacggctctccccttcaa
ccgccgtcgcttcagttggcgaccaccgagcagctgccggcaaagagatcgcttctcggc
acgatgcagagtccgtcagccggtgctgccgccaccgcgtttcccgttcgatctctcacg
ccgcgatctccgtggctcacgagccgaggaggcttgagcagggatccgaagcctcgtggc
agcgtctcggctttgactccaacgagtgccgtgaaagctgtcagcacgcccacttcagcg
gtgagacccggaagctcagtttccgttgcgactccatcgagcggtggatggcttttcaag
cctcgtgagaatcctcgagctctcttcattcgaccggaaggcgcctcgcccttgcccgct
ccatctgttgccttggcggtttctccgcagcgcgaagctcacagccccgagaacagacaa
gtgcacttcgcggatgacaaggagaacacgccgaagaaaagtggcgcgaatgccatcgat
gcgatcatgccgaagctcaccggaaaggggtacagcatgaatccgactgttgagcaaatg
gagaggatgtttgagcgaaacggcgacgccgcgcttgccgcaatcgataacttttctgtg
tcgaatgaagcctacggtcgcgtcaaatggctcgagcccgtggatgtgcgcgggctagat
ctcgacaaaatcgtctctttcgaacaagcatgcctgtgtctgtatcccgaagatcaggac
atcgagcctcccgaggagggtcaaggcttgaagaagcgagctgaggtcactctctacggc
atcttgccgaagaagtcgggtgcggacgcgaaggaaaagtaccgtgaaaagattgccaag
cagactgaaaaggctggcgcagaactcgtggagtacaacgcggacactgggatctggaaa
ttcatccttcagctgtga
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