Ostreococcus tauri: OT_ostta01g04980
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Entry
OT_ostta01g04980 CDS
T01358
Name
(RefSeq) Helicase, C-terminal
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta01g04980
Enzymes [BR:
ota01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OT_ostta01g04980
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
Pre-60S particles
Helicases
OT_ostta01g04980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF3418
ResIII
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
34945538
NCBI-ProteinID:
XP_022838314
OrcAE:
OT_ostta01g04980
UniProt:
A0A090M4B9
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Position
1:803088..804905
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AA seq
605 aa
AA seq
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MDLARDDVADDHALRAWTDLGLHRAVARALVREHKTRPTAVQRRAIPLALEGRSVVVRSS
TGSGKTMSYVAPIVHALCGTASERKRGLRAIVFAPTRELARQVRRACASTTRLCAPGCRV
GELPAPSAGTSVLRETAGSPPEILVSTPARVAECVRGGYFPPGALEEELETVVLDEVDLL
LSFGYVDDIKSVMKAVKRGTRVMMLSATLSPEVEELRDVVAHKPTTIDVEDEEAAMKEEG
DDQDDGKPSAPNISHYSLEIAKSSDRLLYTMALLRLGLCKKKVLVFVSNADAAVRLRLFL
HKFGVPTCALHSELPANSRAHILQEFNRGVYDFMVAAADDARVATEVEEEEEEDKAPTRE
SKKKKKDRRDKEFGVVRGIDFQAVGTVINFEVPATAAAYVHRVGRTGRAGKSGTAITIVS
PTEEEAFKQIQEDLVSTVGDTVAATQVIQPFDRLPKEAVDALRYRAEDAARAVGKTAVKE
ARVRELKQELLNSERLAAHFEDNADDLALLKHDSSLSKNPDAKHLSHLPGYLRGTKKRGD
SRAVEPDSKHAKAAANYQLDVDVAEFGSKKKRKRSDKRETGPDLRQKHKFKGGFKKKSTG
RKRSR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgcgcgcgacgacgtcgcggacgaccacgcccttcgcgcgtggaccgacctc
ggtctccatcgagcggtcgcgcgcgcgttggtgcgcgagcacaagacgcgaccgaccgcg
gtgcagcgtcgagcgattccgctcgcgctcgaaggacgctccgtcgtcgtccgttcgagc
acggggagcgggaagacgatgtcgtacgtcgcgccgatcgtgcacgcgttgtgcgggacc
gcgagcgagcgcaaacgggggcttcgagcgatcgtgttcgcgcccacgcgcgagctcgcg
cgtcaggtgcgccgcgcgtgcgcgtcgacgacgcgactgtgcgcgccggggtgtcgagtg
ggtgaactcccggcgccgagcgcggggacgagtgttttgagggaaaccgcggggtcgccg
ccggagattttggtgtcgacgccggcgagggtggcggagtgcgtgcgcggcgggtacttt
ccgccgggcgcgctcgaggaggagttggagacggtggtcctggacgaggtggatctgttg
ttgtcgttcgggtacgtggacgatattaagagcgtgatgaaggcggtgaaaagaggaacg
cgggtgatgatgctgagcgcgactttgagcccggaggtcgaggagttgagagacgtcgtg
gcgcacaagccgacgacgatcgacgtcgaggacgaggaggcggcgatgaaagaggagggt
gatgaccaagacgatgggaagccaagtgcaccgaacatctcgcactactcgttggagatt
gcgaaatcgtccgatcgcttgttgtacaccatggcgttgctgcgtctcggtttgtgcaag
aaaaaggtgctcgtcttcgtgtcgaacgcggacgcggcggttcgtcttcgattgttcctg
cacaagtttggcgtgccaacgtgtgcgcttcatagcgagctaccagcgaactcgagagcg
cacattttacaggaattcaatcgcggcgtgtacgacttcatggtggccgcggcggacgac
gccagggtagcaacggaagttgaggaagaggaggaagaggataaggcaccgacgcgtgag
agcaagaaaaagaagaaggatagacgcgataaggagtttggtgtcgtgcgcgggatcgat
ttccaagccgtcggcacggtgatcaatttcgaagttccggcgacagccgccgcttacgtg
caccgcgtcggacgcactggccgagcggggaagtctggtacggcgataaccatcgtctcc
cccacggaggaggaagcgtttaagcaaatccaggaagatttagtgagtacggttggggac
accgtcgctgctacgcaagtaattcagccgttcgatcgacttcccaaggaagcggtggat
gctctgcgttaccgcgcggaagacgccgctcgagcggtagggaaaactgcggttaaggag
gcgcgtgtacgtgagttgaagcaagaactgttgaactcggagcgtttagcggcgcacttt
gaagataacgccgacgacttagccttgctcaagcacgatagcagtctgtcgaagaatcca
gatgcgaagcacttgagccacttgcctgggtacttgagaggcactaagaaacgcggtgat
tccagagcggtggagccggattcaaaacacgcgaaagcggcggcgaactatcagctcgac
gtcgacgtcgccgagttcggctcgaagaagaagcgtaagcgcagcgacaaacgcgagacc
gggcccgacttgcgtcagaaacataaattcaagggtggtttcaagaagaaatcgaccggg
cgcaagcgcagtagatga
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