Ostreococcus tauri: OT_ostta01g05460
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Entry
OT_ostta01g05460 CDS
T01358
Name
(RefSeq) Transcription factor TFIIE, alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ota
Ostreococcus tauri
Pathway
ota03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OT_ostta01g05460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ota03021
]
OT_ostta01g05460
Transcription machinery [BR:
ota03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
OT_ostta01g05460
Prokaryotic type
Archaeal type
TFE
OT_ostta01g05460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
FaeA
Motif
Other DBs
NCBI-GeneID:
9834697
NCBI-ProteinID:
XP_003074599
OrcAE:
OT_ostta01g05460
UniProt:
Q01FP4
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Position
1:885486..886748
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AA seq
420 aa
AA seq
DB search
MSEHKKLMRMTARAFYATSYAKERLNAQTSVDARAGANVKNVNVDGVGATPSATKAPVVD
KKTKLDDPRVVEVVVDALTRRTWVREDDLASDLKLSYKQTRKLLTYLEREKIVNRAHVRE
KDRLRAQALAERGITDAPEVKRTVSWCSLNYGRALDVTRYRLHMMKKQARQAVDKGKVYE
VYVCVGPREFCGKMYSSLDAAALLDPTELIFKCSNCGCEVKQAGKDGAPEPEGVARETKE
VLQKRYNELERQFKPLEAQLAKAMKTPAPLYGTLTEWAVARKRYAQNKGGGGGGSGAGKR
GGAALDVHLEETKFVVELGSTAEEQQKQAELDAIKVQPEWVTRNTFEKEDAAHENAGEKQ
GNGEHATPSAASEMQEQYLKALLSALQKQQEPKLEEAATEVAQEVVAAVDDLFDEWEDVA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcacaagaagctcatgcgcatgaccgcgcgcgcgttctacgccacgtcgtac
gcgaaagagcgcctgaacgcgcaaacgagcgtcgacgcgcgtgcgggggcgaacgtcaag
aatgtgaacgtcgacggcgttggggcgacgccgagcgcgaccaaggcgccggtggtggat
aagaagaccaagctggatgacccgcgcgtcgtcgaggtggtcgtggacgcgctgacgcga
cggacgtgggtgcgagaggacgatttagcgagcgatctgaagctgagttacaagcagacg
agaaagctgctgacgtacttggagcgggagaagattgtgaaccgagcgcacgtgcgagag
aaggatcgattacgagcgcaggcgctggcggagcgggggatcacggacgcgccggaagtg
aagcggacggtgagctggtgctcgttgaactatggacgcgcgctcgacgtgacgaggtac
aggctgcatatgatgaagaagcaggctcggcaggcggtggataagggaaaagtgtacgaa
gtgtacgtgtgcgtcggtccgagggagttctgtgggaaaatgtactcgagcctggacgcg
gcggcgctcttggatccaactgagttgatttttaagtgctccaattgcgggtgcgaggtg
aagcaggcggggaaggacggcgctcccgagcccgaaggcgtggccagagaaacaaaagag
gttctgcaaaaacgttacaatgagcttgagcgacaattcaaaccgctcgaggcccagttg
gccaaggccatgaagacgccagcgccgttgtacggaacactcacggagtgggcagtggct
agaaagcggtacgcgcagaataagggtggcggcggcggtggcagtggcgcgggaaagcgc
ggcggcgcggcgctcgacgtgcacttggaggagacgaagttcgttgttgagctcggctcc
acagcggaggagcagcaaaaacaggcggagctcgatgccatcaaagtgcaaccagagtgg
gtgacgcgaaacacattcgagaaagaggacgcggcgcacgaaaacgcgggtgaaaagcaa
ggtaacggtgagcacgcaacacccagcgctgcgtcagagatgcaagagcagtatttgaaa
gctctcctatcggcgctgcaaaagcaacaagagcctaaactggaagaggctgccacggaa
gtcgctcaggaggtcgttgctgccgtggacgatctgttcgatgagtgggaagacgttgcg
tga
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