Ostreococcus tauri: OT_ostta01g05670
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Entry
OT_ostta01g05670 CDS
T01358
Name
(RefSeq) Transcription termination and cleavage factor C-terminal domain
KO
K14407
cleavage stimulation factor subunit 2
Organism
ota
Ostreococcus tauri
Pathway
ota03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
OT_ostta01g05670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta01g05670
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
OT_ostta01g05670
U7-dependent histone pre-mRNA processing factors
OT_ostta01g05670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
RRM_10
RRM_occluded
Ddi2_HDD
Motif
Other DBs
NCBI-GeneID:
9836326
NCBI-ProteinID:
XP_022838347
OrcAE:
OT_ostta01g05670
UniProt:
A0A090M4G4
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Position
1:complement(<924505..>925639)
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AA seq
314 aa
AA seq
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MPEGTVFIGNVPYDATEASLTEIFCECGPVRELRLVTERDTGKLKGYGFVEFDDFATAMS
AVRNLNGREYNGRQLRVDHAETMKNGGGQTGVSAIHGDGGVGHAAPSASVSLRADAPIGT
NAAKASQQGMRHAFEGVVTSTTGAAMDLLTKRVADLTPTQLYEIMSQVKQMTESDPAQAR
TLLVNNPQLSLALFQAQLVLGMVKPPAGGATAPPMAPHLVGQQARRTVPPPPPPPVVRAV
NVPPPPMAPVRAPPAAPVAPMAPPSTVPGQGMDQQQALLRQVLSMTPQQIAMLPPDQRAQ
VEYLRQLAAQQGMV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagggcacggtgttcatcgggaacgtcccgtacgacgccaccgaggcgtcgctc
acggaaatcttctgcgagtgcggtccagtgcgagagctccggttggtcaccgagcgagac
acggggaagctcaagggctacggctttgttgagttcgacgatttcgccaccgcgatgtcg
gcggttcgtaatctgaacggtcgggagtacaacgggaggcagttgcgggtcgatcacgcg
gagacgatgaagaacgggggcgggcagacgggggtgagcgcgatccacggggatggcggc
gtcgggcacgcggcgccgagcgcgagcgtgtccctgcgcgcggacgccccgatcgggacg
aacgcggccaaggcgtcgcagcaagggatgcgacatgcgtttgagggcgtggtgacgtcc
accacgggggcggcgatggatctgttgacgaagcgcgtcgcggatctcacgccgacgcaa
ctgtacgagatcatgtcccaggtgaagcagatgacggagagtgatccggcgcaggcgcgg
acgctgttggtgaataacccacagttgtcgttggcgctttttcaggcgcagttggtgctc
gggatggtaaaaccaccggcggggggagcgacggcgccgccgatggcgccgcacctggtg
gggcagcaggcgcgtcggacggtgccgccgccgccaccgccgccggtggttcgggcggtg
aatgtgccgccaccaccgatggctccggtgagagcgccaccggcggctccagtggcgccc
atggcacctccatcgacggtaccgggacaagggatggatcagcagcaggcgctgctgaga
caggtgctgtcgatgacgccgcagcaaatcgctatgctgccaccggatcagcgagcgcag
gtggagtatctcagacagctcgcggcgcaacagggcatggtttga
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