Ostreococcus tauri: OT_ostta02g00310
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Entry
OT_ostta02g00310 CDS
T01358
Name
(RefSeq) RINT-1/TIP-1
KO
K20474
RAD50-interacting protein 1
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ota04131
]
OT_ostta02g00310
Membrane trafficking [BR:
ota04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
OT_ostta02g00310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
COG4_C
Motif
Other DBs
NCBI-GeneID:
9832652
NCBI-ProteinID:
XP_003074763
OrcAE:
OT_ostta02g00310
UniProt:
Q01F80
LinkDB
All DBs
Position
2:complement(81088..83205)
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AA seq
705 aa
AA seq
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MSDLESTPDARVSELREAVDAAHASVVDVFYRASIALGPPIADEDVDACIATARARDAVR
TGRSALALAMAYRACASVSELEDEDGALEKLERAAACAREAATLIADMEEANTREKVERE
KTGEIGVEVCDALREATWASVLQGRLRTTGWPPSLRPSDLRDFAWSLRLSRSDGGQDAKG
EACAVRALRALREASVARVTYVGEESFAHDDVALAFVEDLAEELRETFATTGSLSDPRKP
GRLFACAKELVDQTPSIVRTELVRVVFVEEPKTAVAITRRYLSLLVHAVSEVIQTHVCVA
CASSDQPWWLHVADECRMFDNHVLSTPYAKIDETPKILDALVHEHAHAKAWMDAECELAT
SRASKSWSDAKCWLVKSGDSENRTPRVAHDVVQEVKNAFESSRGLSRSDWRLYFVDRVAT
PLLEEFREECESRAVGSKGLGSLVASTGSWHSGASGTSVVAATVNACVFVAQELRVLAEE
THVLEFGGESRLEAHASKFEKFNARWIEAISDAAVTQFTDKVLGNAYTGLTHFQPYECVR
NDDEDEDGTRNPAPSAFLITALGGLHERVEDARTALEVTSFEKCRRAMVSKTAQVIVDRI
VCVAIFSRAGTKQLERDVVAYLDVFSTTSAKNEGSSALRSKILEECVAVLSCDASVARAL
VQALRSDGIKGLAIVNALKAELKIFQLDDQTLLRVLSRRADSCNV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttggaatcgacccccgatgcgcgtgtctccgagcttcgcgaggccgtcgac
gctgcgcacgcgagtgttgtggatgtgttctaccgtgcgtcgattgcgctcggaccgccg
atcgcggacgaggacgtggacgcatgcatagcgacggcgcgggcgagagacgcggtgcga
acgggacggagcgctctggcgcttgcgatggcgtatcgcgcgtgcgcgagtgtgagcgag
ctcgaagatgaggatggtgcgctggagaagctcgagcgcgcggcggcgtgtgcgcgagag
gcggcgacgttgatagcggatatggaggaggcgaatacgagagagaaagtcgagagagag
aaaacaggcgaaatcggggtcgaggtgtgcgacgctttgcgcgaggcgacgtgggctagc
gttttacagggaagattacgtacgactggatggcctccaagtttgcggccgagcgatttg
cgtgatttcgcgtggtcgctgcgactcagtcggagtgacggcggccaagatgccaaggga
gaagcttgcgccgtgcgcgctcttcgcgccctgagagaagcctccgtagcgcgcgtcacg
tacgtgggtgaggaatcgttcgctcacgacgatgtggctctggcattcgtggaagattta
gccgaggagttgcgcgagacgtttgcgacgactggctctctgagcgatccaagaaagccc
gggcggctgttcgcctgtgcgaaggagctggtcgatcaaacgccctccatcgtgcgcaca
gaactcgttcgtgtggtgttcgttgaagaaccgaagacagcggtggcgattacgaggcga
tacctctctctgctggtgcacgcggtttcagaagtcatacagacgcacgtctgcgtcgca
tgcgcatcgagcgatcaaccgtggtggttacacgtcgcggacgagtgtcgcatgttcgat
aatcacgtcttgagcacgccgtacgcgaagattgatgagactccgaagatattagacgca
ttagttcacgagcatgcgcatgccaaggcgtggatggacgctgagtgcgagcttgcgacg
tcacgagcgagcaaatcgtggagcgacgcaaagtgttggctcgtgaagagcggagactcg
gaaaatcgaacgcctcgcgtggcacacgacgtcgttcaggaggtgaagaatgcgtttgag
agctccagagggctgtcgagatctgattggcgtctgtattttgtagacagagtagcgaca
ccactcctagaggagtttagggaggagtgcgagtcgcgagcggttggttcgaaaggattg
ggatcgctcgtcgcgtcgactgggagttggcactcgggtgcgtccggtacgagcgtggtg
gcagcaacggtgaatgcatgcgtattcgttgcccaagagctccgcgtgctggcagaggag
acgcacgtgctagaatttggcggcgaatcgcgtctagaggcgcacgcgagtaagtttgag
aagtttaatgcgcgctggatagaggccatctcggacgccgcggtgacgcaattcacggac
aaggtgcttggaaacgcttacacgggtttgacgcactttcaaccgtatgaatgcgtcagg
aacgacgacgaggacgaagatgggactcggaatcccgccccgagtgcatttttgatcaca
gcgctcgggggccttcatgagcgcgtcgaagacgcacgaacagcgctcgaagtcacgtcg
ttcgaaaagtgtcgacgtgcgatggtgagcaaaacagctcaagtcatcgtcgaccgcatt
gtgtgcgtcgccatcttctctagagcgggcacgaagcagttagagcgcgatgtagtcgcg
tacttagacgtcttctcgacgacatcggcgaagaacgaggggtcttccgcgctcaggtcg
aagattctcgaggagtgcgtggcggtgttgtcgtgcgacgcctcagtcgcgcgagctctc
gtccaagcgcttcgaagcgacgggatcaagggtctggcgatcgtgaacgcactcaaagcc
gagcttaagatatttcaactcgacgatcaaacccttctccgcgtgctctcccgccgagcg
gactcttgcaatgtgtag
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