Ostreococcus tauri: OT_ostta02g00410
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Entry
OT_ostta02g00410 CDS
T01358
Name
(RefSeq) WD40 repeat
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
ota
Ostreococcus tauri
Pathway
ota03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OT_ostta02g00410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta02g00410
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
OT_ostta02g00410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
WDR90_beta-prop_4th
Ge1_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_BBS7
Beta-prop_Vps41
PQQ_3
BBS2_Mid
Hira
Motif
Other DBs
NCBI-GeneID:
9832556
NCBI-ProteinID:
XP_003074776
OrcAE:
OT_ostta02g00410
UniProt:
Q01F67
LinkDB
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Position
2:102366..103556
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AA seq
396 aa
AA seq
DB search
MKGSHAGRDICEVDQELVGTPTKRCARENPPTRRVEFASSIKDKVVKRWTIIKHASGEAD
RSHARHTAVACTRRKQRETSRRRFNFTRLKDFDFKSSHEGTILGVSFHHASNVAACVTAG
SRVHLLRIDGTSNNIIQSLSLTGRVKTVEFSRVNDQVIVCGKSGLFFGNVESGSVEKISL
PTSCATDGTFVQTAGSDIVGVVSSNELCILSQKSRTCVASVKMSAPVRSCTFSPSGNEIT
CAAADGKIYCWDVRTQRCARVAGGFDSVVQICSSPDGKNVITGLDDGTVEIYNASDISWD
VAKDGQKKARSISSFRTRITSLNVDPRADFVAMSSSLERNALRLLHLPSLSLVNTWPTSM
TPLHYVSAHAFSHDGTILAIANARGRVLTYSASTPS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaagggctcgcacgcggggagggatatatgtgaagtcgaccaagagcttgtcggtacg
ccgacaaagcggtgtgcgagagaaaacccgcccacgcgacgcgtggagtttgcctcttcg
atcaaagataaagtcgtcaagcgttggaccatcatcaagcacgcgtctggtgaggcggat
cgctcccacgctcggcatacggcagtcgcatgtaccagaaggaaacaaagagagaccagc
aggcgccgtttcaatttcactagactgaaggatttcgacttcaagagctcacatgaaggc
acaatcctcggagtgagtttccatcacgcaagtaacgtagctgcgtgcgtcaccgcgggc
tcacgtgttcatttgcttcgtattgatgggacctcaaacaatataatacagtctttgtcg
ttgactggcagagttaagactgtagagttcagtcgagtgaacgatcaggtgatagtttgt
ggtaaaagtggcttattctttggtaatgttgaaagtggtagcgttgagaaaatttctcta
ccgacaagctgtgcgacagatggcacgtttgtccaaacggcaggttcggacatcgtagga
gttgtcagctcaaacgagttgtgcatattatcacaaaaaagtcggacgtgtgttgcgagc
gtgaaaatgagtgcaccagtacgttcgtgcacgtttagtccctcgggcaatgagatcaca
tgtgcagctgcagatgggaaaatttattgttgggacgtgcgaacacagaggtgtgctcgg
gtcgctggaggttttgatagtgtggtacagatatgttcgtcacctgatggtaaaaatgtc
attaccggcttagatgatggaacggtggaaatctataatgcaagtgatatatcatgggat
gttgcaaaagatggacagaaaaaagcaagaagtatatcaagctttcgcacacgaattact
tctttgaatgtagatcctagggctgactttgtcgctatgtcgtcgtcactcgagcgaaat
gcgttgaggctactccatcttccatctctttctttggtgaacacgtggccaactagcatg
accccattgcactatgtgtctgcacacgcttttagccacgacgggaccatcctggctatt
gcgaacgcaagagggcgagtactcacgtacagcgcgagcacaccctcatga
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