KEGG   Ostreococcus tauri: OT_ostta02g00410
Entry
OT_ostta02g00410  CDS       T01358                                 
Name
(RefSeq) WD40 repeat
  KO
K14553  U3 small nucleolar RNA-associated protein 18
Organism
ota  Ostreococcus tauri
Pathway
ota03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    OT_ostta02g00410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ota03009]
    OT_ostta02g00410
Ribosome biogenesis [BR:ota03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    OT_ostta02g00410
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 ANAPC4_WD40 EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Ge1_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_Vps41 PQQ_3 BBS2_Mid Hira
Other DBs
NCBI-GeneID: 9832556
NCBI-ProteinID: XP_003074776
OrcAE: OT_ostta02g00410
UniProt: Q01F67
LinkDB
Position
2:102366..103556
AA seq 396 aa
MKGSHAGRDICEVDQELVGTPTKRCARENPPTRRVEFASSIKDKVVKRWTIIKHASGEAD
RSHARHTAVACTRRKQRETSRRRFNFTRLKDFDFKSSHEGTILGVSFHHASNVAACVTAG
SRVHLLRIDGTSNNIIQSLSLTGRVKTVEFSRVNDQVIVCGKSGLFFGNVESGSVEKISL
PTSCATDGTFVQTAGSDIVGVVSSNELCILSQKSRTCVASVKMSAPVRSCTFSPSGNEIT
CAAADGKIYCWDVRTQRCARVAGGFDSVVQICSSPDGKNVITGLDDGTVEIYNASDISWD
VAKDGQKKARSISSFRTRITSLNVDPRADFVAMSSSLERNALRLLHLPSLSLVNTWPTSM
TPLHYVSAHAFSHDGTILAIANARGRVLTYSASTPS
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgaagggctcgcacgcggggagggatatatgtgaagtcgaccaagagcttgtcggtacg
ccgacaaagcggtgtgcgagagaaaacccgcccacgcgacgcgtggagtttgcctcttcg
atcaaagataaagtcgtcaagcgttggaccatcatcaagcacgcgtctggtgaggcggat
cgctcccacgctcggcatacggcagtcgcatgtaccagaaggaaacaaagagagaccagc
aggcgccgtttcaatttcactagactgaaggatttcgacttcaagagctcacatgaaggc
acaatcctcggagtgagtttccatcacgcaagtaacgtagctgcgtgcgtcaccgcgggc
tcacgtgttcatttgcttcgtattgatgggacctcaaacaatataatacagtctttgtcg
ttgactggcagagttaagactgtagagttcagtcgagtgaacgatcaggtgatagtttgt
ggtaaaagtggcttattctttggtaatgttgaaagtggtagcgttgagaaaatttctcta
ccgacaagctgtgcgacagatggcacgtttgtccaaacggcaggttcggacatcgtagga
gttgtcagctcaaacgagttgtgcatattatcacaaaaaagtcggacgtgtgttgcgagc
gtgaaaatgagtgcaccagtacgttcgtgcacgtttagtccctcgggcaatgagatcaca
tgtgcagctgcagatgggaaaatttattgttgggacgtgcgaacacagaggtgtgctcgg
gtcgctggaggttttgatagtgtggtacagatatgttcgtcacctgatggtaaaaatgtc
attaccggcttagatgatggaacggtggaaatctataatgcaagtgatatatcatgggat
gttgcaaaagatggacagaaaaaagcaagaagtatatcaagctttcgcacacgaattact
tctttgaatgtagatcctagggctgactttgtcgctatgtcgtcgtcactcgagcgaaat
gcgttgaggctactccatcttccatctctttctttggtgaacacgtggccaactagcatg
accccattgcactatgtgtctgcacacgcttttagccacgacgggaccatcctggctatt
gcgaacgcaagagggcgagtactcacgtacagcgcgagcacaccctcatga

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