Ostreococcus tauri: OT_ostta02g00500
Help
Entry
OT_ostta02g00500 CDS
T01358
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K10754
replication factor C subunit 1
Organism
ota
Ostreococcus tauri
Pathway
ota03030
DNA replication
ota03410
Base excision repair
ota03420
Nucleotide excision repair
ota03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OT_ostta02g00500
03410 Base excision repair
OT_ostta02g00500
03420 Nucleotide excision repair
OT_ostta02g00500
03430 Mismatch repair
OT_ostta02g00500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ota03032
]
OT_ostta02g00500
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta02g00500
DNA replication proteins [BR:
ota03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
OT_ostta02g00500
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
OT_ostta02g00500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
Rad17
AAA_22
nSTAND3
RuvB_N
AAA_18
RNA_helicase
Sigma54_activ_2
AAA_16
AAA_11
TIP49
AAA_30
AAA_19
AAA_33
RsgA_GTPase
AAA_17
AAA_14
CbiA
NPHP3_N
NTPase_1
AAA_assoc_2
Hydin_ADK
AAA_24
ABC_tran
ResIII
Zeta_toxin
TsaE
AAA_7
Motif
Other DBs
NCBI-GeneID:
9837055
NCBI-ProteinID:
XP_003074791
OrcAE:
OT_ostta02g00500
UniProt:
Q01F52
LinkDB
All DBs
Position
2:123126..124787
Genome browser
AA seq
553 aa
AA seq
DB search
MNDSAKADVKSSLQRLSEGLDLSSRSSASNRVSGNKRASSTENLRIKVARILSNQHATED
SVERLWTDEFSPRTVTDLVGNSSAINVLRSWLLQWSARKFNVQLKGQDRKCILISGPPGV
GKTTTAVLLCKELGLQTLNINASDSRGKSGKVVDGIAGTLASAVREFVTNKCIGSDSEQT
VRSALIMDEVDGMAGGDRGGLSELIDIIKQTRIPIICICNDRYSQKLKTLANYCVDLPFQ
RPNKLQIRKYVVQLANSKRLQIDQDSVDSLIEANNNDLRSIINQLQLWSMGAILESKETS
RVKKDVSLGVFQAIDVMFRPSVHGTLDARLSLSFTHGDLLSLFVHENYPCMRPKDSVSDL
QRLVHMAAAASRVSEGDVFASTISRTQNWSILPSANVIASVLPSSAVSGAREISAQGERN
THRFPSCLGRISSKSKSQRLLHKTHMHVCASGILRTSAREFCLRYMNLVRRLLTLPLFSE
ARGGKELAGVENVLDFMHTYHFTREDWDDIQIFTRLSGKGPLFESPGAQIHTSVKAAFTR
ACKHSLSLSTKAT
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacagcgccaaagcagatgttaagtcgagtctgcaaaggttgagcgaaggacta
gacttgagttctagatcttccgcaagcaaccgggtgagcggcaacaagagggctagttct
acggaaaatctaaggattaaagttgctcgcatcttatcaaatcaacacgccaccgaagat
agtgtagagcggctctggactgacgaattttcccctagaactgttactgatttagttggt
aacagtagtgccatcaatgtgcttcgttcctggcttttacaatggtcagctagaaaattt
aacgtacagttgaaaggacaggacaggaaatgtattttaattagtggaccacctggagtt
ggcaaaacaactacggcagtgctgttgtgcaaagaacttggtttgcagacgttgaacatc
aacgccagcgattctaggggtaagtctgggaaggtagttgatggtatagcgggtacttta
gcgagtgcagtgcgggaatttgtgacgaacaagtgtattggttccgactctgagcaaact
gtgagatccgctctcataatggatgaagttgacggcatggcgggtggtgaccgaggtggt
ctttcggagttaattgacatcattaaacagacgcgcatcccaataatatgcatctgcaat
gatcgttattcacaaaagttgaagactctggcaaactattgcgtcgatctgccttttcaa
cgaccaaataaactccaaattcgaaagtatgtggtgcagcttgcgaactctaagcgtcta
caaatcgaccaggattcggtagatagcctaattgaagcgaataataatgacttgcgatca
atcataaatcagttgcaactttggagtatgggcgcaatactcgaatcaaaagaaacaagt
agggtgaagaaagatgtctctctcggtgtttttcaagcaattgatgtcatgtttcgaccg
tccgttcatggcacgctcgatgctagattaagtctgagctttacacatggagatctttta
tccttgtttgtgcatgagaattatccgtgcatgcgaccaaaggatagcgtcagtgacttg
cagcgacttgtccacatggcggcagcggcttcacgtgtttcggagggggacgtgttcgcg
agtactattagtaggacgcaaaactggagtattctaccatcggccaatgttattgcatct
gtcttgccatcttcggctgtttctggtgccagagaaatatctgctcagggagaacgtaac
actcatcggtttccgagttgtttgggtaggatatcgagtaagtcgaagtcacaacgtctt
ttgcacaagacgcatatgcatgtttgtgcaagtggtatacttcgtactagcgcacgggaa
ttctgtttaagatatatgaacctggtgagaagattgctgaccctgcctctttttagtgaa
gctcgtggcggcaaagaactagcaggcgtagaaaatgtgcttgattttatgcatacttac
cacttcacgagggaggactgggatgatattcaaattttcacaagactatcaggaaagggt
cccttgtttgaaagtcctggcgcacaaatacatacgtcggtgaaggcagcgttcacaaga
gcttgtaaacacagtctgagcttgagcacgaaagcgacttga
DBGET
integrated database retrieval system
