KEGG   Ostreococcus tauri: OT_ostta02g00880
Entry
OT_ostta02g00880  CDS       T01358                                 
Name
(RefSeq) DNA-directed RNA polymerase, 30-40kDa subunit,conserved site
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
ota  Ostreococcus tauri
Pathway
ota03020  RNA polymerase
ota03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    OT_ostta02g00880
  09124 Replication and repair
   03420 Nucleotide excision repair
    OT_ostta02g00880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ota03021]
    OT_ostta02g00880
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta02g00880
Transcription machinery [BR:ota03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     OT_ostta02g00880
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      OT_ostta02g00880
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac
Other DBs
NCBI-GeneID: 9835646
NCBI-ProteinID: XP_003074839
UniProt: Q01F02
LinkDB
Position
2:complement(234482..235530)
AA seq 301 aa
MERQTGGDSHVSVTRLEDQSITFSLKGVDVSLANALRRVMIADVPTLAIDLVEVVENSSV
LCDEFLAHRLGLIPLSSKKVSELFKPYEYMGEDDSATDVHLELNVRCLTEQAMDVTSEDM
VSYDERVKPITFQGTVSDAAKPGGILIVKLRNKQQLLLKCIARKGTGKDHAKWSPVATAV
FKHDPVVHVNQELLKTLSGSDKRAIVESDPSQMFKYDADLDTISLTSTGSCTFDGEIVKK
VNEMGKHGLIDIRPCFDSFTFHVESTGVLDAEEIVLQAVHILQTKLDTVGGELDMIESEN
F
NT seq 906 nt   +upstreamnt  +downstreamnt
atggagcgtcagacgggcggtgacagtcacgtctccgtgacccgtttggaggatcaaagc
atcacctttagtttgaaaggtgttgacgtgagtcttgcgaatgcactcaggcgtgtgatg
atcgcggatgtcccgactttagccattgatttagtcgaggttgttgagaattcgtccgta
ttgtgtgatgagttcttggcccaccgtttaggcttgatcccacttagtagcaaaaaggtg
tccgagcttttcaaaccgtacgaatacatgggcgaagacgattctgctactgatgtgcat
ttagagctaaatgtgcgctgtctaactgagcaagcaatggatgtcaccagtgaggacatg
gtatcgtacgacgaacgagtcaaacctatcaccttccaaggcactgttagtgacgctgca
aaacctggtgggatcttgatcgtcaagctacgtaacaaacaacagttattgttgaaatgt
attgcgcgaaaaggtaccggcaaagatcacgcaaaatggtcgccggtagctacggcggta
ttcaaacacgatccagttgtccatgtaaaccaagaactcctgaagactctaagtggttcg
gataaacgagctatcgtagaaagcgatccttcacagatgttcaagtacgatgcagatcta
gacaccatatctttgacttcaacagggagctgtacttttgacggggagattgtgaaaaag
gtgaatgaaatgggcaagcacggcttgattgatatacgaccgtgtttcgacagttttaca
ttccacgttgagtcaactggcgtgcttgatgcggaggaaattgttctgcaagctgtgcac
attttgcagacgaagttggacacagttgggggcgaacttgacatgatagaaagcgaaaat
ttttag

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