Ostreococcus tauri: OT_ostta02g00960
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Entry
OT_ostta02g00960 CDS
T01358
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
ota
Ostreococcus tauri
Pathway
ota03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OT_ostta02g00960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta02g00960
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
OT_ostta02g00960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3_assoc_6
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
UTP6_C
Motif
Other DBs
NCBI-GeneID:
9832664
NCBI-ProteinID:
XP_022840692
OrcAE:
OT_ostta02g00960
UniProt:
A0A090M7D4
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Position
2:250786..252564
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AA seq
399 aa
AA seq
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MNTIEEALDSSVDQLSQLELAYSVNSTQTRQILAKRSQYEHFLARRTSSTESAFFAYASY
ELALASTLTSRNKRQDRNKVNSVIFRHVRGILARAVREHVWSLRLWHIFVRFCEEHGSSR
LLSRALARALRYHSTCVGLWLRAAAFEFQTNQNMNAARSLFHRALRSCDQNQDIWIAYFR
LEIMYANMLKTRQDVLISGSPRERGNKSTNEVKFDVVHGALALCVFQKAIESQKGQKDRA
FTMMRMFAVATDLHSPSRLLKHMRLSDESSTSVAAVFLNDASSHNIQSFSSLHMFLKLRD
HHKTIFRQIRNSSLNTTKFNYLAEAWTDPSFLINGVSRRDNVAILVARQGTLDSYLCYVY
NRQLKLAMEVNVLSREQDYLHKGGTFRALNCLSDDSFQS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccatcgaagaggcgcttgactcgtctgtggaccagcttagtcagctagagctt
gcgtattcggtcaactcaacgcagacgagacaaattctagcgaagcggtcccaatacgag
cactttcttgcccgtcgaacctcctcaactgaaagcgctttttttgcgtacgcgtcatac
gagctggctcttgcgagtacactaacgtcacgaaacaagagacaggaccgcaataaggtc
aactcagtcatattcaggcatgtacgagggattcttgctagagcggtccgcgagcatgtc
tggagtttacgtttgtggcatattttcgttcgtttttgcgaggagcatggcagcagtcgg
ctcttgtcgagggcgttggcacgggcactcagataccacagcacgtgtgtcgggttatgg
ttacgcgccgctgctttcgagttccaaacaaatcaaaatatgaatgccgcgagaagttta
tttcatcgagctctgcgaagctgtgatcaaaatcaagatatttggatagcttattttcgg
ctggaaataatgtatgcgaatatgttgaaaactagacaagacgtgttaatttctggaagc
ccacgggagagaggcaataagtcaacgaacgaagtaaaatttgatgttgtgcatggtgca
ttggcactatgtgtctttcaaaaggcaatcgagtcccagaaaggccaaaaagatcgtgcc
tttactatgatgaggatgtttgctgtcgccacggatctgcatagtccgagtcgattactc
aagcatatgagactatcagatgaatcatcaacgtctgttgcggcggtgtttttgaacgat
gcaagcagtcataacattcaaagcttcagcagtttgcacatgttcctgaagttacgcgac
caccacaaaacgatatttcgacaaattcgaaactcgagtctcaacactacgaaatttaac
taccttgctgaggcgtggacagatccatcatttctcataaatggagttagtcggcgagat
aatgtcgctatacttgttgcaaggcagggtacacttgacagttatttgtgctatgtgtac
aatagacagctcaagctagcaatggaggtgaacgtactttctcgagagcaggactatctt
cacaaaggagggaccttccgcgcgctgaattgtctgagtgatgacagcttccagagttga
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