Ostreococcus tauri: OT_ostta02g02030
Help
Entry
OT_ostta02g02030 CDS
T01358
Name
(RefSeq) Helicase, C-terminal
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta02g02030
Enzymes [BR:
ota01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OT_ostta02g02030
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
90S particles
Helicases
OT_ostta02g02030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
9832568
NCBI-ProteinID:
XP_003075008
OrcAE:
OT_ostta02g02030
UniProt:
Q01EH4
LinkDB
All DBs
Position
2:427719..428978
Genome browser
AA seq
419 aa
AA seq
DB search
MATFDELGLCNVVLKILKRVHFRSPSDVQSTCIPQILAGKDVIGIANTGSGKTAAFALPI
VDMLSRDPYGIFALCLSPTRELANQIADQFTVFGAGTGLNCMVITGGEDLIQQATALSRR
PNIVVATPGRLFEHFMHSSNTVQYFSKLKCLILDEADRLLDSSFAAELKYLMSNLPQQRQ
TLMFSATITKSVTALQSMLGDAVFYYEDKSVKKTAVRCSQSYCFMPERIKDVNLVKLVRE
LALVEAKRTIIFTATIQKCELLSQMLTTLGIPSSSLHAAKKQKERLNSLGVFKNGTVQIL
VATDVAARGLDLPSVDMILNYDVPTDVRQYIHRIGRTARFEASGKAVTFVTQFDILKLKH
IEKTIGQQLDSYELEGSSGAELVGEVFAARRVAKMRMASPGGFDEKLRAKKKRLQSNWF
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctttgacgagttgggcctgtgcaacgttgtacttaaaattctgaagcgcgtc
cacttccggagtccgagtgacgtacaatcaacgtgcataccccaaatactagccggaaag
gatgtgatagggatcgcgaacacggggagtgggaagacagctgcgtttgctttaccgatt
gtagacatgttaagtagagatccttacggaatatttgctctttgcctcagtcctacaaga
gagctggctaatcaaattgctgatcagtttacagtatttggtgctggaactggtctcaac
tgcatggtcatcacaggcggtgaggacctaattcaacaggcaacggctctttcacgtcgc
ccaaatatagtagtggcgacccccgggcgattgttcgagcactttatgcactcatctaat
actgttcagtatttcagcaaactcaagtgtctaatacttgatgaagcagataggctattg
gactcttcatttgcggctgagttaaagtatctcatgtcaaacttgcctcagcaacgccag
acactgatgttttcggcgaccatcactaaaagtgtgacagctctacagtcgatgctaggt
gacgctgttttttattacgaagacaaaagtgttaagaaaacagccgtgagatgttcccag
tcatactgtttcatgccagaaagaatcaaggacgttaacttggtgaagcttgtcagagag
ctggctcttgttgaggcgaaacgcactataatatttactgcaactattcagaagtgtgag
ttgctctcacagatgctcactactttgggtataccgtcatcctctttgcacgctgctaaa
aagcagaaggaaaggcttaactctttaggcgtgtttaagaacggaacagttcagattttg
gtggcgacggacgtcgctgcacgtggactcgacttgcccagtgtggatatgattctgaac
tatgatgttcctactgacgtccgccaatacattcaccgaatcggtcgaactgctcgattt
gaggcgagtggtaaagctgtcacattcgtcacacagttcgatattttgaaattgaagcac
atcgagaaaactatcgggcaacaactagactcgtacgagttggagggatcaagcggtgct
gagctagtgggtgaagtgtttgccgctagaagagttgcaaaaatgcggatggcgtcaccg
ggaggattcgatgaaaaattgcgtgcgaagaaaaaacgactacagagtaactggttctag
DBGET
integrated database retrieval system
