Ostreococcus tauri: OT_ostta02g02750
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Entry
OT_ostta02g02750 CDS
T01358
Name
(RefSeq) Exoribonuclease, phosphorolytic domain 2
KO
K11600
exosome complex component RRP41
Organism
ota
Ostreococcus tauri
Pathway
ota03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OT_ostta02g02750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta02g02750
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
OT_ostta02g02750
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
OT_ostta02g02750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
9837049
NCBI-ProteinID:
XP_003075115
OrcAE:
OT_ostta02g02750
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Position
2:563680..564492
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AA seq
270 aa
AA seq
DB search
MEYVSFEGLRLDGRRANEIRRPRHAFAIDAQCDGSARFELGNTVIECRVDGPSERKFGGA
EEGASEACALTCSHGRSAFASDGVQAGRKGDGRSKQFESVLAKALTSAVCVDLMPRCEVQ
VRTTVLCDDGGARAASACAAVLALADAGIPLKGIIGSCTVGHLDGEALIDVNRDEERGRG
PELWTCALSAGDVPDDDENEDDGEDHLMGATGNHITVIVEELERGKTTMETFKSMHDLAL
AGCETSARYLRISLRARTRALAATRALEKF
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgtctcgttcgaaggtttacgcctcgacggccgccgagcgaatgagatccgc
cgaccgcgtcacgcgttcgccatcgacgcccagtgcgatgggagcgcgcgattcgagtta
gggaacaccgtgatcgagtgccgcgtggacggaccgagcgaacggaagttcggtggggcg
gaagagggggcgagcgaggcgtgcgcgttgacgtgctcgcacggacgaagcgcgttcgcg
agcgacggcgtccaggcggggaggaagggtgacggacggtcgaaacagttcgagagtgtc
ttggcgaaggcgttgacgagcgcggtgtgcgttgatttgatgccgaggtgcgaggtgcag
gtgcgcacgacggtgctgtgcgacgatggaggagcgcgggcggcgagcgcgtgcgcggcg
gttctcgcgctcgcggacgctgggatccctttaaaggggatcattggttcgtgtaccgtg
gggcatctcgacggcgaagcgctgatcgatgtgaatcgagacgaggaacgcggacgggga
ccagagctgtggacgtgcgcgctgagcgctggagacgtcccggatgacgacgaaaacgag
gatgatggggaagatcacctcatgggtgctaccgggaatcatatcacggtgatcgtcgaa
gagcttgagcgcgggaagacgacgatggagacgttcaagtccatgcacgaccttgcgctc
gctggatgtgagacctcggcgaggtatctcagaatatcactccgagcgcgaaccagagcc
ctagccgccacgcgcgcgctcgaaaagttctag
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