Ostreococcus tauri: OT_ostta02g03670
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Entry
OT_ostta02g03670 CDS
T01358
Name
(RefSeq) SNF2-related
KO
K10841
DNA excision repair protein ERCC-6
Organism
ota
Ostreococcus tauri
Pathway
ota03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OT_ostta02g03670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ota03036
]
OT_ostta02g03670
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta02g03670
Chromosome and associated proteins [BR:
ota03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
OT_ostta02g03670
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
OT_ostta02g03670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
HDA2-3
Latarcin
Motif
Other DBs
NCBI-GeneID:
9836780
NCBI-ProteinID:
XP_003075208
OrcAE:
OT_ostta02g03670
UniProt:
A0A090MDZ1
LinkDB
All DBs
Position
2:complement(719357..722758)
Genome browser
AA seq
1133 aa
AA seq
DB search
MERVSARGVDASVVARAVVADAIARERPESAREEDEDVAAASTPSEQLLERLTRTSRETS
AELDAVREALETIDGSVDALRVAIGRKRAEGLEKKLREQAKAIRAAERAAREERDAVERR
KRSNEETNGTTKRGVIDLTSTSAVSRGMEVKNAPTKKTTVKKAAPKADDDFFDDLFDASK
GAATETERERLIRIGVLTPFDRLEGFERAVKERESSSKAAAATAAWRESRNKTKTLTAEE
MPRLEANARPFASRATRNATSESTKKQMAERRAEWKAKMLENDGAVAGKRTRQSGRTMHD
SDEEYANYEETAEEDRNVSEEVEFAGGLSIPGDTYERLLPHQKTCLKWLWELHCQRAGGI
IGDEMGLGKTVQVSSFLCALHHSGMYSPSIIVCPATMLRQWRRELRIWAPKLKATILHDS
AMSSSSGKTKARERERVFDMCVRDGDGILVTTYEQMRLFRDKICSVRWGYAVLDEGHKIR
NPDADITIVSKQLQTVHRIVMSGAPIQNRLSELWSLFDFVFPGKLGTLPVFQAQFAVPIQ
IGGYTNASNQQVTTAYRCAVTLKDLIAPYLLRRMKCDVDVKLPEKTEQVLFCPMTQEQRE
AYRAYLASREVEEILDGSREALGGIDVLRKIVNHPDLLERRTQAASEEYGDASRSGKLQV
TLKVLSLWREQGHRCLVFSQTQQMLDILEAAVARAGYSYRRMDGNTSIGMRMSLIDEFND
NDKGIFVFLLTTKVGGLGVNLTGANRVMLFDPDWNPSTDAQARERAWRIGQQKEVTVYRL
ITAGTIEEKVYHRQIYKEFLTSKVLKDPKQRRFFKARDMADLFTFDEVACGGGGDESKGT
IETVELFSEVEGQILRGDVEESVISEEGAEDGEVEHGEWDPNDNHAPPKRTAKKIDGHRV
RVETARDPDAHVNGDSGAGDAQILRGLFDSGNIQVAMNHDKIMGAAGVDRMAHNAEAERV
ARRAAEALRLSAQSARAGLAVHVPTWTGNRGAVHSTAPSASVVRPLGRFGRTSIQSRSND
SSTAALGSRALLERIAARREDNARAVEADLESSELDETQANDMMRDIILLLKSRGGRAST
SFVIDAFQDRVQSHQHALFRKLLKLAADLERSPTSSREGSTSSWVLKQEFADL
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgtctccgcgcgcggcgtcgacgcctccgtcgtcgcccgcgccgtcgtcgcc
gacgcgatcgccagagagcgtccagagagcgcgcgtgaggaagatgaagacgtcgcggcg
gcgtcgacgccgagcgaacaactgctcgagcgcttgacgcggacgtcgagagagacgtcg
gcggagctcgacgcggtgcgcgaggcgttggagacgatagatggaagcgtggacgcgctt
cgggtggcgatcggacggaagcgggcggagggattggagaagaagttgcgggaacaggcg
aaggcgattcgggcagcggagagagcggcgcgcgaggagcgggacgcggtcgagcgtcgg
aaacggtcgaacgaggagactaatgggaccacgaaaagaggcgtgatcgatctgacgtcc
acgagcgcggtgagccgggggatggaggtaaagaacgctccaactaagaagacaactgtg
aagaaggcggcgccaaaggcggacgacgatttttttgacgatctcttcgacgcgtccaaa
ggtgcagcgacggagacagaacgcgagcggttgattcgtatcggtgttctcacaccgttt
gatcgattggaagggtttgagcgcgctgtgaaggagcgtgagtcgtcgagcaaggcggcg
gcggcgaccgcggcgtggcgcgagtcgagaaataagacgaagacgttgaccgccgaggaa
atgccgcgtttggaagcgaacgcacgaccgttcgctagtagggcaacgcgaaatgcgaca
agtgagtcgacgaagaaacagatggccgagcgacgagcggagtggaaggcgaagatgctc
gagaatgacggcgccgtcgccgggaagcgaacacgacaaagcggacgcacaatgcatgac
agcgacgaagaatacgcgaattacgaggagacggctgaggaagatagaaacgtctcggaa
gaggtcgagtttgcgggcggtttatccattccgggcgacacgtacgagcgtttacttcca
catcagaagacgtgcctgaaatggctgtgggagctccactgccaacgcgccggaggtatc
atcggcgacgagatgggactcggaaaaaccgttcaagtctcgtcgtttctttgtgcgttg
catcactcagggatgtactccccgtcgatcatcgtatgtccggcgacgatgcttcgacag
tggcgtcgtgagcttcgaatctgggcgcccaagcttaaggcgacgatattacacgattca
gcaatgtcgagctcgtccgggaagacgaaggcgcgcgagcgcgagcgtgtgttcgacatg
tgcgtgcgcgatggcgacggtatcctggtgacgacatatgagcagatgcgtttatttcga
gacaaaatatgctccgtgcgatgggggtatgccgtgttagacgaggggcacaaaattcga
aatccggatgcggacatcacgatcgtctccaagcagctgcagacggtccatcgcatcgtc
atgagcggtgctccgattcaaaacagattatctgagctctggtcgctctttgatttcgta
ttccccgggaaacttgggactctacccgtgtttcaagcgcagttcgcggtaccgattcaa
ataggcgggtacaccaacgccagcaaccaacaggtgacgactgcctatcgttgcgcagtc
accctgaaagatctcatcgctccatatcttttgcgcagaatgaagtgtgacgtggacgta
aagcttcccgagaagacggagcaggttctcttttgtccaatgacacaggaacagcgcgag
gcgtaccgagcgtacctggccagccgcgaagtggaagagattctggatggatcgcgcgag
gctctcggcggaatcgacgttttgcgaaagattgtcaatcaccccgacttgctggagcgt
cgcacgcaggcagcaagcgaagagtacggtgacgcttcgcgaagcggtaagctccaggtg
acgcttaaggtgctttccctctggcgcgagcagggccatcgatgcttggttttcagccag
acacagcagatgttggacatccttgaggccgcagtcgctcgagcgggatacagttaccgc
cgtatggacggaaacacctcgatagggatgcgcatgtcactcatcgatgagttcaatgac
aacgacaagggcatcttcgtattcctgctcacgaccaaagtcggaggcttgggagtcaat
ctcaccggcgctaatcgcgtcatgttattcgatccggattggaatccatccacggacgcg
caggcacgcgagcgcgcctggcgcatagggcaacagaaagaagtcaccgtctatcgactc
atcaccgcaggcacgatcgaggagaaggtgtatcacagacaaatttacaaggagtttctt
acgagcaaggtgctcaaggatccaaaacagcgtcggttcttcaaggctcgcgatatggcg
gatctcttcacgttcgatgaagtcgcgtgcggcggcggtggagacgaatcgaagggcact
attgaaacggtcgaactcttttcagaggtcgagggccaaattttgcgcggcgacgtcgag
gaatccgtcatctcagaagaaggggcagaggacggtgaggtcgagcacggtgaatgggat
ccaaatgataatcatgcgccgccaaaacgcacggcgaagaagatcgacggccacagggtg
cgagtggagacggcgcgcgatccggatgcccatgtaaatggagacagcggcgcaggtgac
gcgcagattttgcgcggcttattcgattccggcaacatccaggtcgcgatgaatcacgac
aagatcatgggcgcagctggtgttgatcgcatggctcacaacgccgaggccgagcgcgtc
gctcgaagggcggccgaggcgctccgattatcggcgcaaagcgctcgcgctggattggcg
gtgcatgtccccacttggacgggaaaccgcggtgccgtgcactccaccgcaccgagtgca
tctgtcgtgcgtccgctcggacggtttgggcgtacgagcatccaatcccgctcgaacgat
tcgagcaccgccgcgttgggctctcgagcgctcctcgagcgcatcgccgctcgaagagag
gacaacgctcgtgctgtcgaggccgatctcgagagctccgagcttgacgagacgcaggcg
aatgacatgatgcgagacattatccttctgctcaaatctcggggcggtcgcgcgtcgaca
agcttcgtcatcgatgcttttcaggaccgagtgcagagccatcagcacgcgctattccgc
aagctcctcaagctcgccgccgacctcgagcgctcaccaacgagctcgcgcgagggctcc
acaagctcttgggtgctgaaacaagaattcgccgatctatga
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integrated database retrieval system
