Ostreococcus tauri: OT_ostta02g04090 Help Entry OT_ostta02g04090  CDS       T01358                                  Name (RefSeq) Helicase, C-terminal   KO K14442   ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] Organism ota  Ostreococcus tauri Pathway ota03018   RNA degradation Brite KEGG Orthology (KO) [BR:ota00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     OT_ostta02g04090  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ota03019]     OT_ostta02g04090    03012 Translation factors [BR:ota03012]     OT_ostta02g04090 Enzymes [BR:ota01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      OT_ostta02g04090 Messenger RNA biogenesis [BR:ota03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      OT_ostta02g04090 Translation factors [BR:ota03012]  Eukaryotic type   Initiation factors    Initiation associated factors     OT_ostta02g04090 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  R3H DEAD Helicase_C HA2_C HA2_N OB_NTP_bind Ank_2 AAA_19 ResIII ATPase Ank_4 AAA_22 Motif Other DBs NCBI-GeneID:  9836744 NCBI-ProteinID:  XP_003075253 OrcAE:  OT_ostta02g04090 UniProt:  A0A090M809 LinkDB All DBs Position 2:799216..802725 Genome browser AA seq 1169 aa AA seqDB search MPRGGRGSGGRGSAPKVRPVTELARIDIAKALEDFRADPNASELEFPPNVDNHFRAVVHA ECKKLGLKSKSHGKGDDRRVRVTKAEAFRPDDAEDLFDLGLGARAAAAMEEYFEKAPQSE AEIRRSVAGSVGDFDGDGEREARVKTKKRSYKGGVEMRGRAIDAGEATRRADALAGRIRS DAALGELQKKRAALPVAKFRDDILNAVRNHQVTLVAGSTGCGKTTQVPQYLLDDAWASGS GAAIVCTQPRRISAMTVSERIANERGESIGQSTVGYQIRLESRVAADCSLLFCTSGVLLR KLTSETSDKTCEALTHIIIDELHERDLFADFLTIILRQVLPKHPHLKLVLMSATMREDLF SNYFGGCPVISVPGFIHPVTEYHLEDILPMVGWGGTHHTAVGAKKSDGPIVNAPTSGSGV DVMREAIMRAFLEDTDESFDWLMQCARESDPQGLSYVNVCHSTGATALMAAAGKGRQMEV SQLLGLGASPAMRSSDGSNAADWAERFGHIELAEALRSVDDEDDHAGSHEQSALLLSNYQ LSIDPDEVDIDLIHNLIVWIVRERTVDEKSEGAILVFLPGWDEISKLRDSLSADYNVCRA ASILPLHSMVAPAEQRKVFQRPAKGMRKIVLSTNIAETAVTIDDVVFVIDSGRLKEKSYD AYSAVSTLQAAWISQASAKQRRGRAGRVRPGECFRVYSSSRYSSFAEYQLPEMQRSPLEE LCLQVRVLAESGAGVVEDGPGSTAGFLARAIEPPVPQATENAVQLLKDIGALTNDERLTR LGRHLGELPLHPRVGKMILYAALFGVLDPILTVACAAAYRPPFIISTDGRRTGDIARAAF SDQAGGGSDQLAVTKAYEAWERVLRDGGRSGERMFLNANSLSPSTLHMIKGMRQQLVQAL IQRGIISDLRSASVNSQSGALVRAVLAVGMYPLVGRFLPQCKAPTLATLRGERVRVHAHS VNGKVDVAEISSRRESGEKIATLCCFDELIRGSHAVQVRECTLVAAAAIVFVCAKLTVRP DVPHVDPETGEEIPRPGPPSALLVVDDWLRFRVPLRAVAQITVLRLRLQNAFAMKVEHPQ EMLPKDIHESVRCVSRVLADAADELLNRHGGGGVSFARNVGGGDYGGGRGGRGGGRGGRG RGDGRFDGRGGGRGGDRGRGVSNIPQPRR NT seq 3510 nt NT seq  +upstreamnt  +downstreamnt atgccgcgcggcggacgcgggtcaggcggacgcggttccgcccccaaggtccgccccgtc accgaactcgcgcgcatagacatcgccaaagccctggaggatttcagagccgatccgaac gcgagcgaattggagttcccaccgaacgtggacaatcacttcagagccgtcgtgcacgcg gagtgcaagaagctcgggttgaaatcaaagtcccacggcaagggcgacgaccgacgcgtg cgcgtgacgaaggccgaagcgtttaggcccgatgacgcggaggatctgttcgatctcggg ctcggcgcgcgcgcggcggcggcgatggaggaatactttgaaaaggcgccgcagagcgaa gcggagatccggcggagcgtcgcgggttccgtcggtgatttcgacggcgatggcgagcgt gaagcgcgtgtgaagacgaagaagcggtcgtacaagggtggggtggagatgcgggggaga gcgatcgatgcgggtgaggcgacgcggagggcggatgcgttggcggggagaatacggagc gacgcggcgttgggggagttgcaaaagaagcgcgcggcgctgccggtggcgaagtttcgg gatgatatattgaatgcagtgaggaatcatcaagtcaccctcgtcgcggggtccacgggg tgcgggaagacgacgcaggttccgcagtacttgttggacgacgcgtgggcgagcggaagc ggcgcggccatcgtgtgcacgcagccgaggagaatcagcgccatgacagtgtcagagaga atcgcgaacgaacgcggggagagtatagggcaaagcacggtgggttatcagattcgtttg gagagtcgagtcgcggcggactgttcgttgttgttttgcacgtcgggcgtcttgctgagg aaactcacaagcgagacttcggataagacgtgtgaggcgctgacgcacatcatcatcgat gaattacacgagcgcgatctttttgccgatttcttgaccatcatcctgaggcaagtattg ccgaagcacccgcatctgaagctcgtgctcatgtctgcgactatgcgggaggatttgttt agcaattactttgggggatgtcctgtgatctccgttcccggtttcattcatcccgtgacg gagtatcacttggaagatatcttgccaatggttggttggggtgggactcatcacaccgcg gttggggcgaagaagagcgatggacccattgtgaacgcgccgacgtcgggctccggcgtg gatgtcatgcgcgaggccatcatgcgcgccttcttagaggataccgacgaatcgttcgat tggttgatgcagtgcgcgcgagaaagcgatccacaaggtctatcgtacgtcaacgtgtgt cattccaccggcgcgaccgcgctcatggcggctgcgggtaaggggcgacagatggaagtg tcccagctcctcggactcggcgcgtcgccagcgatgcgaagctcggatgggagcaacgct gccgattgggccgagagatttggccacatcgagctcgcggaggcgctcagaagcgtagac gatgaggatgatcacgccgggagtcatgagcaatcagcgctcctcctcagcaattatcaa ctctccatcgacccggacgaggtggacattgatttgatacataatctcatcgtgtggatc gtgcgcgagcgcaccgtggatgagaagtcggagggtgccattttagtatttcttccagga tgggacgaaatatccaagctccgcgactccctgagcgctgattacaacgtgtgccgtgca gcaagcatcctgcccttgcactcgatggtcgctccggcggaacagcgaaaggtgtttcag cgcccagccaagggcatgcgaaagatcgttctttcaacgaatatcgccgagacggcagtg acaatcgatgacgtcgtgttcgtgatcgatagtggtcgactcaaggagaagagctacgat gcctactcggctgtttcgacgctgcaagcggcatggatttctcaggcgagcgcgaagcag aggcgcggtcgagctggtcgcgttcgcccgggtgagtgcttcagggtctattcgtcctca cgttacagctcgttcgcggagtatcagctccccgagatgcagcgttcgccgctcgaggaa ctctgtttgcaagtgcgcgtgttggcagagagcggtgccggtgtcgtcgaagacggtccc ggaagcactgccggttttctcgctcgcgcaatcgaacctccggtgcctcaggcgacggaa aacgcggtgcaattgctcaaggacattggagcgctcacaaacgacgagcgattgacccga ctcggtcgtcacctcggcgagcttccattacatccgcgcgtcggcaagatgattttgtac gccgcgctctttggagtcctagatccgattctcaccgtggcttgcgcggcggcgtaccgc cccccgttcataatctctaccgatggaaggcgaacgggtgacatcgcgcgcgcggcgttc tccgatcaagccggcggcggaagcgaccagctcgctgtgaccaaggcgtatgaggcatgg gaacgcgtgttgcgagacggcggtcgttcaggagagagaatgttcctgaacgccaactcg ctttcgccttcgacgctacacatgatcaagggtatgagacagcagctcgttcaagcgttg attcagcgcggcatcatctccgacctgcggagcgcgagcgtgaactcgcagtcaggggca ctcgttcgagcggtgctcgctgtcggcatgtacccactcgtggggagatttttaccgcag tgcaaggcgccaacgttagcgacactgcgaggtgagcgcgttcgcgtgcacgcgcatagt gtcaacggaaaggtcgacgtcgcggagatctcatcgagacgagagagcggcgaaaagatc gccacgctctgctgctttgacgagctcattcgaggctcgcacgcggtgcaggttcgagag tgcactctcgtcgccgcagctgcaatcgtgtttgtttgcgccaaacttaccgtgcgaccg gacgtcccgcacgtcgatccggagaccggggaggagattccgagacccggaccgccttcg gcgctcctcgtcgtcgacgactggttgagatttcgcgtgccgttacgcgcggtggcccag atcaccgtcctccgtttacgcttgcaaaatgcgttcgcgatgaaggttgagcatccgcaa gagatgctcccgaaggacatccacgaatcggtacgatgcgtttctcgagtgctcgcggac gccgcggatgaactcctgaaccggcacggcggcggcggcgtgtccttcgcgcgaaacgtc ggcggtggcgactacggcggtggacgcggtggacgcggtggcggacgcggtggacgcgga cgcggagacggccgtttcgacggacgcggcggcggacgcggcggcgatagaggccgaggc gtctccaacataccgcaaccgcgacgctaa

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