Ostreococcus tauri: OT_ostta02g04320
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Entry
OT_ostta02g04320 CDS
T01358
Name
(RefSeq) Synaptobrevin
KO
K08516
synaptobrevin homolog YKT6
Organism
ota
Ostreococcus tauri
Pathway
ota04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
OT_ostta02g04320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ota04131
]
OT_ostta02g04320
Membrane trafficking [BR:
ota04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
OT_ostta02g04320
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
Motif
Other DBs
NCBI-GeneID:
9832729
NCBI-ProteinID:
XP_003075280
LinkDB
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Position
2:complement(859809..860411)
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AA seq
200 aa
AA seq
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MKVTALSLWKHNGDDADPHALGHACDVAEFGFFQRASVREMLIFISRTVAKRTPIGARQS
VEQDAYMVHVSNKGGLVAVAVMDREYPSRSAFCVLAKMMDEYETRAFGANWRATTADSDA
SAEMLEEMLVKFQDPSAADKILKIQRELDDTKVVLHKTIDGVLARGEKLDNLVDKSTDLS
LASQMFYKQAKKQNQCCTMM
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaccgcgctatcgctgtggaagcacaacggcgatgacgcggacccgcacgcg
ctggggcacgcgtgcgacgtcgctgagtttggttttttccaacgcgcgagcgtgcgagag
atgctcatcttcatctcccgcacggtggccaagcgaacgccgatcggggcgaggcagagc
gtggagcaggacgcgtacatggtgcacgtgtcgaataaaggtggcttggtcgccgtggcg
gtgatggatcgagagtatccgtcgagaagcgcgttttgcgtcttggcgaagatgatggat
gagtacgagacgcgggcgttcggggcgaattggcgagcgacgacggcggactcggacgcg
agcgcggagatgttggaggagatgttggtgaagtttcaagacccgagcgcggcggataag
attttgaagattcagcgagagttggacgacaccaaggtggtgttgcacaagacgatcgac
ggcgtcttggcgcgaggggagaaactcgataatttagtggataagagcaccgatctgtca
ctggcgagtcagatgttttacaagcaggcgaagaaacaaaatcaatgctgcacgatgatg
tga
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