Ostreococcus tauri: OT_ostta03g00170
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Entry
OT_ostta03g00170 CDS
T01358
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ota
Ostreococcus tauri
Pathway
ota03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
OT_ostta03g00170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta03g00170
Enzymes [BR:
ota01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
OT_ostta03g00170
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
OT_ostta03g00170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
CbiA
AAA_24
MMR_HSR1
ATP_bind_1
AAA_16
Motif
Other DBs
NCBI-GeneID:
9832853
NCBI-ProteinID:
XP_003077928
UniProt:
Q01DD5
LinkDB
All DBs
Position
3:30518..31804
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AA seq
428 aa
AA seq
DB search
MDATGVDGRDDVVSHALAREEELRVETLRSEGCAIALVSGHAEIFGSELARGQSVKIGGG
KKVAVFTFHGATIEITGKVEIAYVAGETPMVSYANAHAVLNAKRERAGAAGSSEEGPRVM
CVGPTDVGKSTVCSILCNYAARSGQAPLYVDLDLGQGALTVPGTICAAPVDAQIDLEEGI
PLEMPLVYFYGDLTVNNPEYYKHIVTRLGALLDERSKANDDARAAGCVVNTMGWIDGMGL
ELLLHAREALKIDHVLVIGQERLYGQLQQKLAGTDCQVFRMQKSGGVVERTQEFRRATRD
RMFKEYFYGPTGELAPASQTAYFSQISLYRIGGGPRAPASALPIGQTASTDPMRIAPVVP
STSLLHSVLAVSHGKTQGDLLNSNVAGFIYITEVDMIQKKFTYLSPCPGELPSNVLLVGN
LKWLGLDN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgaccggcgtcgatggacgcgatgacgtcgtctcgcacgccctggcgagagag
gaagagctcagggtggagacgctgcgcagcgaagggtgcgcgatcgcgctcgtcagtggt
cacgcagagatcttcggttccgagctcgctcgggggcagagcgtgaagattggcggtggg
aaaaaggtggcggtgttcacgtttcacggcgccacgatcgagatcaccgggaaggtggag
atcgcgtacgtcgcgggggagacgccgatggtgtcgtacgcgaacgcgcacgccgtgctc
aacgccaagcgcgagcgggcgggggcggcgggttcgtcagaggagggaccgcgagtgatg
tgcgtgggaccgacagatgtgggtaagagcacggtgtgctcgatcctgtgcaactacgcc
gcgcgaagtggacaagcgccgctgtacgtcgatttagacttaggacaaggcgcgctgacg
gtgccagggacgatttgtgccgcccccgtggacgcgcagatagaccttgaggagggtatt
ccgctcgagatgccacttgtgtacttttacggagatctgacggtgaacaatccggagtat
tacaagcacattgtcaccagactgggcgccttattggacgagcgaagcaaagcgaacgac
gacgcgcgagcggctgggtgcgtcgtgaacacgatgggctggatcgatgggatgggtttg
gaactcctcttgcacgctagagaggcgttgaagatcgatcacgtgctcgtcatcgggcaa
gagcgcttgtacggccagcttcaacaaaagcttgccgggacggattgccaggtgtttcgc
atgcaaaagtcgggaggagttgtcgaacgcacgcaagaatttcgccgggcgacccgcgac
cggatgtttaaggagtacttttacggccccaccggagagctcgctccggcgtcgcagact
gcgtacttttcacaaataagtctgtatcgcatcggtggcggcccgagggctccggcttcc
gcgcttccaatcggccaaacggcgtcaacggatcccatgcgcatagcccccgtggtgccg
tcgacgtcgcttttgcacagcgtcttggcggtcagtcatggaaaaacacagggcgacttg
cttaactcaaacgtcgccggtttcatatacatcacagaggtggacatgattcagaaaaag
tttacgtacctcagtccgtgtccgggtgagttaccatccaacgtgttgctcgtcggcaac
ttgaagtggttgggtcttgacaactag
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