KEGG   Ostreococcus tauri: OT_ostta03g00270
Entry
OT_ostta03g00270  CDS       T01358                                 
Name
(RefSeq) Armadillo-type fold
  KO
K12828  splicing factor 3B subunit 1
Organism
ota  Ostreococcus tauri
Pathway
ota03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OT_ostta03g00270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ota03041]
    OT_ostta03g00270
   03036 Chromosome and associated proteins [BR:ota03036]
    OT_ostta03g00270
Spliceosome [BR:ota03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    OT_ostta03g00270
 Complex B
    OT_ostta03g00270
 Complex C
   U2 SnRNP specific factors
    OT_ostta03g00270
Chromosome and associated proteins [BR:ota03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    OT_ostta03g00270
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT HEAT_EZ TOR1L1_N HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Cnd1 Htt_N-HEAT_1 XMAP215_CLASP_TOG Vac14_Fab1_bd HEAT_Maestro HEAT_DAAF5
Other DBs
NCBI-GeneID: 9832939
NCBI-ProteinID: XP_003077937
OrcAE: OT_ostta03g00270
UniProt: A0A096P7F0
LinkDB
Position
3:55245..59021
AA seq 1258 aa
MGDEIEAIEAIERLREARRATRAASGSREGDGRAMERAARVEVEDVDEEGGSARVKTRVK
APLKSYGAPKEFLEEGPLDAEEDEDLESDEALGFGKSKKVIDRESAYSKRRFKRELSPGK
GSEKDAGEGRSYAERMQHAAIDRERDNTLRNIEKKQKEEAERLAEEARLAAARTSEPAAS
DAPRAAKRKRRWDAKPDDSAAGPAPAAPRVSEWESDDSAATGARWDDATPRGPSKWDETP
KHTSQWETMESGTNAGDAKATPRRSRSRWDETPMVRASGDPSATPAWTGGETPVIHAGGE
TPKTVPGLATPSAAQIAAHQAMLQGNVPMTPEQYQQMRWQREIEERNRPQTDEELDELLP
SEGYKILEPPASYVPIRTPARKLTQTPMPYGANAGFFSIPEEDRGQKFDVSLAPEGLPEM
KPEDVQYFAPLLKETDEEALTIEEQKERKIMRLLLRVKNGTPQQRKSALRQITDRAKELG
AGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDY
YARVEGREIISNVAKAAGLATMIAAMRPDIDNVDEYVRNTTARAFAVVAQALGVQSLLPF
LKAVCHSKKSWQARHTGIKIVQQISILLGCAVLPHLKSLVDIIEHGLSDENQKVRTITAL
SIAALAEAATPYGIESFDNVLKPLWKGVRAHRGKVLAAFLKAIGFIIPLMDAMYANYYTR
EVMVILIREFATADEEMKKITLKVVKQCVATDGVEPEYIRNEVMPEFFKHFWVRRMALDR
RNYQQLVETTLEIALKVGAAEIIGRIVEDLKDESEPYRRMVMETITKVIEELGVTAVDTR
MEELLIDGMLYAFQEQTTDEGDIMLKGVATIVNALGLRAKPYLPQICGTIKWRMNNKSPE
IREQAADLISAIAPVMRKCEEEQLLGHLGVVLYEYLGEEYPEVLGSILGALKAIVSVQGM
TRMTPPIKDLLPRLTPILKNRHEKVQENTIDLIGRIADRGAEYVAAREWMRICFELLELL
KAPKKAIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQMRVCTTVAIAIVAETCAPF
TVLPALMNEYRVPEINVQNGVLKSLAFLFEYIGEMGKDYIYAITPLLEDALMDRDLVHRQ
TAAVTVKHLALGCAGLGCEDAVTHLINYTWPNVFEPSPHVINAVTEAIEAARVALGPQFV
LAYTLQGLFHPARKVRDIYWRIYNNLYIGSEDALVPAYPALEDDGPNTYRRVELDCFI
NT seq 3777 nt   +upstreamnt  +downstreamnt
atgggggatgagatcgaagcgattgaagcgattgaacgattgcgcgaggcgcgacgggcg
acgcgcgcggcgagtgggtcgagggagggcgacgggcgagcgatggaacgcgcggcgcgc
gtcgaggtggaggacgtggacgaggaggggggaagcgcgcgggtgaagacgcgcgtgaag
gcgccgttgaagtcgtacggcgcgccgaaggaattcttagaggagggcccgctcgacgcc
gaggaggatgaagacttggagagcgatgaagcgcttggattcggaaagtcgaaaaaagtg
atcgatcgagagagtgcgtacagtaaacgacggttcaagcgcgagctcagtcctgggaag
gggtcggagaaggatgcgggcgagggtcgaagctacgccgagcgcatgcaacacgcggcg
atcgatcgagagcgagataacacgctgcgaaacattgaaaagaaacaaaaagaagaagcg
gaacgtttggcggaggaggcgcgactcgctgcggcgcgaacgagcgaacccgcggcgtcg
gacgctccaagggcggcgaaacgtaagcgtcgctgggacgccaagccagacgatagcgcg
gctggaccggcgccggccgcgcctcgcgtgagcgagtgggagagcgacgatagtgcggcg
acaggtgcgcgttgggacgacgccacgccgcgcggaccgtccaagtgggatgagaccccc
aagcacacgtcgcagtgggagaccatggagagcggcaccaacgcgggcgacgcgaaggca
acgcctcgacgctcgcggagccggtgggacgagacgccgatggttcgagccagcggagac
ccgagcgcaacgccggcgtggaccggtggagagactccggtcattcacgcgggtggtgag
acgcctaagactgttcccggtttggccacgccgtctgcagcgcagatcgcggcgcatcag
gcaatgttgcagggtaacgtccccatgactcccgagcaatatcagcaaatgcgctggcag
cgcgagatcgaagagaggaaccgcccgcagactgatgaggaactcgacgagctgttgcct
tcggagggctacaagattctcgaaccgcccgcgagctacgttcccattcgtactccggcg
cgaaagctgacgcagacgccgatgccgtacggggcaaacgccggtttcttctccattccg
gaggaggatcgcgggcaaaagtttgacgtcagtctcgcgccggagggattgcccgagatg
aaacccgaagacgtgcaatacttcgcgcctttgttaaaggagacggacgaggaggctctg
accatcgaggaacagaaggagcgcaaaatcatgcgattgttacttagagtgaagaatggc
acgccacagcagcgtaagtcggcgttgcgacaaatcactgaccgggcgaaagagctcggc
gccgggcctctcttcaatcaaatcttgcctcttctcatgtctccgactttggaggatcaa
gagcgtcacttgcttgtcaaagtgattgatcgcatcttgtacaagctcgacgacttggtg
cgaccgtacgtgcacaagattctcgtcgtgattgagcccttgctcatcgatgaggactat
tacgctcgcgtcgaagggcgcgaaattatcagtaacgtcgccaaggcggcgggcctcgcg
acgatgattgccgcgatgcgtccagacatcgacaacgtggatgagtacgtgcgaaacacc
acggcgagagcttttgccgtggtcgcccaggcgcttggtgttcagtctctgcttccattt
ttgaaggcggtgtgtcacagtaagaagagctggcaagctcgtcacactggtatcaaaatc
gttcagcaaatttccatccttcttggatgcgccgtgctcccgcacctcaaatcgttagtc
gatatcatcgaacacggattgagcgatgagaaccaaaaagtgcgcaccattacggcactt
tcgatcgccgcgctcgcagaagccgctaccccgtacggtatcgagtctttcgacaatgtc
ctcaagccgctatggaaaggcgttcgtgcccatcgtggcaaggttttggcggctttcctc
aaggcgattggtttcatcatcccgctcatggacgcaatgtatgccaattactacactcgc
gaagtgatggtgattctgattcgagagttcgccacggcggatgaagagatgaagaagatc
acactcaaggtggttaagcagtgcgttgccacagatggagtcgaacccgagtacattcgt
aacgaggtcatgcccgagttcttcaaacatttttgggtgcgccgcatggcgctcgaccga
cgcaactaccagcaactcgtggagacaacgttagaaatcgcgttaaaggttggcgccgcg
gagatcatcggcagaatcgtcgaagatttgaaagatgaatccgagccttatcgtcgaatg
gtgatggagactatcacaaaggtgatcgaggagctcggcgtcaccgcggtggacacgcgt
atggaagagcttctaatcgacggcatgctctacgctttccaagagcaaaccacggacgag
ggtgacatcatgctcaagggcgtcgctacgatagtcaacgctctcggacttcgcgccaag
ccgtacttaccacagatttgtgggacgatcaagtggcgcatgaacaacaagagtccagaa
attcgcgagcaagcggccgatttgatcagcgccatcgctcccgtcatgcgaaaatgcgag
gaagagcaactgctcgggcacttgggcgtggtcttgtacgaatacttaggtgaagagtac
ccagaagtcctcggttccatcttgggtgccctgaaggcaatcgtgagcgttcaaggcatg
acgcgaatgacgcctcctatcaaggatctcttgcctcgcttgacaccaattttgaagaat
aggcacgaaaaggtgcaagagaacaccattgacttgatcggacgcatcgctgatcgcggt
gccgagtacgtcgcggcacgcgaatggatgcgaatttgcttcgagcttcttgagttgctg
aaggcgccgaagaaggcgattcgtcgcgcgacggtgaacacctttggttacatcgccaag
gccatcggcccgcaagatgtgctcgctacgctactgaacaacctgaaggtgcaagagcgt
cagatgcgcgtttgtacaactgtggccatcgccatcgtcgcagagacgtgtgcgccattc
accgttcttcctgcgttgatgaacgaataccgcgtcccagagatcaacgtgcaaaacggt
gttttgaaatcgttggccttcttgtttgagtatatcggagagatgggcaaggattacatc
tacgcgatcactccgttgctcgaggacgcgctcatggatagagacttggtacatcgtcaa
acagctgcggttacggtgaaacacctcgctttgggatgcgcgggattaggatgcgaggac
gcggtgacgcacttgatcaactacacttggccgaacgtgttcgagccctcgccgcacgtt
attaacgcggtgacggaggcaatcgaagccgcgcgagtcgcgctcggccctcagttcgtc
ctcgcgtacacgttgcagggattgttccatcccgctcgaaaggtccgagacatttactgg
agaatttacaacaacctgtatatcggctcagaggacgctctcgttccagcgtacccagcg
ctcgaggacgatggtccgaacacttatcgacgtgtagagctcgattgcttcatttag

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