Ostreococcus tauri: OT_ostta03g04030
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Entry
OT_ostta03g04030 CDS
T01358
Name
(RefSeq) Zinc finger, CCHC-type
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ota
Ostreococcus tauri
Pathway
ota03440
Homologous recombination
ota03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OT_ostta03g04030
03460 Fanconi anemia pathway
OT_ostta03g04030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ota03032
]
OT_ostta03g04030
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta03g04030
Enzymes [BR:
ota01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OT_ostta03g04030
DNA replication proteins [BR:
ota03032
]
Eukaryotic type
DNA Topoisomerases
OT_ostta03g04030
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
OT_ostta03g04030
FA (Fanconi anemia) pathway
OT_ostta03g04030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
zf-CCHC
Toprim_4
zf-LITAF-like
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
9833668
NCBI-ProteinID:
XP_003078306
OrcAE:
OT_ostta03g04030
UniProt:
Q01CA7
LinkDB
All DBs
Position
3:complement(<666587..>669115)
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AA seq
842 aa
AA seq
DB search
MPPNARVLNVAEKPSVAKEISRVLSNGTARVREGATAWNKVWEFEHVVRGRPVTMVFTSV
TGHLSNFEFAEERHRRWASVDPRELLVDARVVKRVPEDKRKTAENVKREARGCDTVILWL
DCDREGENIAFEVLEACRQAKPGITALRARFSALGRGDADRALANLVQPNEYEAKAVDMR
MELDLRLGAAFTRFNTLALQRAGVGLPVDDKGKSIVSYGPCQFPTLGFIVQRKWDIDAHV
SEDFWSIKCSHAREGTNTKFEWSRGRLFDRGFASALHNMCARANVATVIDVDGQESRRWP
PHPLNTIEMQKRLNRTLRISPEQIMKIAEDLYNDGFISYPRTETDKFPADFNYDGTLRDL
HPHPQFGFYVDQLINGGRFRQPPGGGKDDKAHPPIYPTKLASEAQYQQMRAKNQHAPKVY
EFVVRHFLATCSHPAIAMKTHVDIVVAGETFRATGVMIRERNYLDIYGPGPPEGPRLAPA
YDNWGNSTLPLYTPGEQFVPALSLHEGQTRPPDYLSEVDLLSLMESHMIGTDATQAQHIE
KVVGERGYARKVGDNRLTPTQLGEALVLAYDRMGVADMWLPTKRAKMEADVDAVAKNRLD
PNAGLRAHLQAMLDAYDRVAADGLTLTTTVGAFMNGQDNAANGVGHRPMPPGNDINGNGA
DAFGDLIGVIRDTCPSCQGESTLRSAPGVRNSKSFIASCAVPHCMSRIAMPSCTRDIKIE
QEGCGRCQGRLLTFKFSTLYLPVGYQHMQRWSGCIFCDAEFQNLLRACQAEDHPPARESP
ARRPNPPPVADGYGRGGRGRGGRGGAAGRRRSRAERDEGVGGQQGNCFKCGEAGHWSMNC
PN
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaacgcgcgcgtcctgaatgtggctgagaaaccatccgtcgcgaaagagatc
tctcgcgtgctctcgaacggcaccgcgcgcgtgcgcgagggcgcgacggcgtggaacaag
gtgtgggagttcgaacacgtcgtccgagggcgaccggtgacgatggtgttcacgtcggtg
acgggacacctgagtaattttgaattcgcggaggaacgacatcgaaggtgggcgagcgtc
gatccgagagagctcttggtggacgcgcgcgtggtgaagcgggtgccggaggataaacgg
aagacggcggagaatgtgaagcgagaggcgagggggtgcgatacggttattttgtggttg
gattgcgatcgggagggcgagaacatcgcgtttgaggtgctggaggcgtgtcgacaggcg
aaaccggggatcacggcgttacgcgcgcggttctccgcgctcggtcgcggtgacgccgat
agggcattggctaatttggtgcagccgaacgagtacgaggccaaggctgtggatatgcgc
atggagttggatctgagactgggtgccgcgttcacacgattcaacacgttggcgctccag
cgtgcgggcgtggggttgcccgtggatgataaggggaagtcgatcgtgtcgtatgggccg
tgtcagttccccacgcttggattcatcgtgcagaggaagtgggacatcgatgcgcacgtg
agtgaagacttttggtccatcaagtgttcgcacgcgagggagggaacaaacacgaagttt
gagtggagtcgcggtcgacttttcgatcgtggcttcgcgtccgctctgcacaacatgtgt
gcgcgcgctaatgtcgcgacagtgatcgatgtggacggtcaagagagtagacgatggcct
ccgcatccgttgaacacaatcgaaatgcaaaagcgtttgaacagaacgctgcgcatttcg
ccggaacaaatcatgaagatcgccgaagacctgtacaacgacggtttcatctcctatccg
cgcacggagacagacaagtttcctgccgatttcaattacgacggcacccttcgagatctt
catccgcatccacagtttggcttttacgttgatcagttgattaacggagggaggtttaga
caacctccgggcggtgggaaggatgataaggcgcaccctccgatttatcccacaaagctg
gcctccgaagcgcaatatcaacagatgcgagcgaaaaatcagcacgcaccgaaggtctac
gagtttgtcgttcgacatttcttggcgacgtgttcgcacccagcaatcgctatgaagacg
catgtcgacattgtggtcgcgggagagacgtttcgagccacgggcgtgatgattcgcgag
cgtaattatttggatatctacggtcctggaccaccagaaggcccgcgattggcgcccgcg
tacgataactggggcaacagcacgctccctttgtacactcctggtgaacagtttgtgccc
gctctgagtttgcacgagggccagacgaggccgccggattatctcagcgaggtcgattta
ctatcgctcatggagtcgcatatgattggaacggacgccacgcaggcgcagcacatagaa
aaagtagtaggggagagagggtacgcgcgcaaggttggcgataatagattgacgcccaca
caacttggcgaggcgctcgttctggcgtatgacagaatgggagtcgccgacatgtggcta
ccgacgaaacgagcgaaaatggaggcggatgttgatgcggtggcaaagaatcgactagac
cctaacgctggcttacgcgcgcacctgcaagccatgttggatgcgtacgatcgagtcgcc
gcagatggactcactctgacgaccaccgtaggcgcattcatgaatgggcaggacaacgcc
gcgaatggagtaggtcatcgaccgatgccacctgggaatgatataaacggaaacggcgcc
gacgcgttcggtgatctcattggtgtcatccgggacacgtgtccgagctgccaaggagag
tcgacgctgcgatcagctccgggcgtgcgcaattcgaagagtttcatcgcctcgtgcgca
gtcccgcactgcatgagtcgaattgcgatgccgagctgcacacgagatatcaaaatcgag
caagaagggtgcggacgatgccaaggacgtctactgacgttcaaattctccaccttgtac
ctcccagttgggtaccaacacatgcaacgatggagtgggtgcatattttgcgatgccgag
tttcaaaacctactgcgcgcgtgtcaagctgaggaccatccacccgctcgcgagtcgcca
gctcgacgaccgaatccgccgccagtggcggacggatacgggcgcggtggtcgcggtcgc
ggcggccgtggcggcgcggctgggcgaagacgctcacgcgctgaacgtgatgaaggcgtt
ggcggccagcagggtaattgcttcaagtgcggcgaggccggacactggtccatgaactgc
ccgaattga
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