Ostreococcus tauri: OT_ostta04g00470
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Entry
OT_ostta04g00470 CDS
T01358
Name
(RefSeq) Cullin repeat-like-containing domain
KO
K10609
cullin 4
Organism
ota
Ostreococcus tauri
Pathway
ota03420
Nucleotide excision repair
ota04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
OT_ostta04g00470
09124 Replication and repair
03420 Nucleotide excision repair
OT_ostta04g00470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ota04121
]
OT_ostta04g00470
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta04g00470
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ota04147
]
OT_ostta04g00470
Ubiquitin system [BR:
ota04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
OT_ostta04g00470
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
OT_ostta04g00470
TCR (transcription coupled repair) factors
Cul4-CSA complex
OT_ostta04g00470
Exosome [BR:
ota04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
OT_ostta04g00470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Fuz_longin_1
DUF2774
Motif
Other DBs
NCBI-GeneID:
9834180
NCBI-ProteinID:
XP_022838681
OrcAE:
OT_ostta04g00470
UniProt:
A0A090N334
LinkDB
All DBs
Position
4:71152..73428
Genome browser
AA seq
758 aa
AA seq
DB search
MSSSRRGDHSRSATGEPSTRSNDGRRSAHGAPGTARGLTIKPFKRAPTVPTEFATRARET
LREAIRRVQAKEVTGVSHEALYRHVENLCVHRRAAEAFEDFQSGADRRAREVLRGLEGRK
IEDSGVFLTKFDETWGDYCAQALTLRSIFLYLDRAQANGGGKSSTLWDVSLRVFHEHLEG
TAKSVKGKVVRGLLDLVERERMGEKIDRALAKRVLRALSALGVYQEAFENVFIEASQEFY
RKEGNEYSVQTDVSDYLKHCERRLEEEAERCANYLDAGTAKALMRTCEQGLIEAHIGDIL
DKGFVDLMRQHRLEDLRRLHSLLARMDGLGRLCSAFVTYLKQQGTAIVKDEARDKDMVDR
LLTMKTAVDEVVSKSFGRTIADGSNDIFINGVKESFESFINCRQNVPAELIAKYIDSKLK
SGSKGLSEEELERTLDKALTLFRYIVGKDVFEVFYKKELSKRLLHGKSASIDAERSMIQK
LKAECGSQFTQHLEGMFKDIDLSREIMQSFRQTFENDPIIEMNVNVITAGCWPSYPSVDV
KLPEELANLQEKFMSFYLGKHSGRKLTWQNSEGHCVLKARFDGGMKELSVSLFQCVILML
FNDSKKLSYTEIAQKTGMEEKELKRALQSLACAKVRILNKEPKSREINDDDSFEVNTALN
ERLFRIKVNSIQVKETAEENKQTMERVFQDRQQQIDAAIVRVMKTRKSLTHALLISELMA
QLKFPTKASDLKKRIESLIEREYLERDREDAQTYNYLA
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgagccggcgcggtgatcactcgcgctcggcgacgggcgaaccgtcgacgcga
tcgaacgacgggcgacgaagcgcgcacggtgcgcccgggaccgcgcgcgggctgacgata
aaaccattcaagcgcgcgccgacggtgccgacggagttcgcgacgcgggcgcgggagacg
ctgcgagaggcgatacgacgggtgcaggcgaaggaggtgacgggggtgagtcacgaggct
ttgtatcgacacgtggagaatctgtgcgtgcacagacgggcggcggaggcgttcgaggat
tttcagtcgggggcggatcgacgggcgagagaggtcttgcggggattggagggacggaaa
attgaggattcaggggttttcttgacgaaattcgatgagacgtggggggattattgcgcc
caggcgttgacgctgcggtcaatctttttgtatctcgaccgcgcgcaggcgaacggaggc
gggaaatcgtcgacgctctgggacgtgtcgctgcgcgttttccacgagcatctcgaggga
acggcgaagagcgtgaagggtaaggttgtcaggggcttactcgatctcgtcgagcgagag
cggatgggggagaagattgatagggcgctcgcgaagcgcgttttgcgagcgctgagcgcg
ctcggggtgtatcaagaggcgtttgaaaacgtcttcatagaggcgagtcaggagttctat
cgcaaggaagggaacgagtactcggtacagacggacgtgtcggattacctgaagcactgc
gaacggaggctcgaggaggaggcggagaggtgcgcgaattacttggacgccggcacggcc
aaggcgctcatgcggacgtgcgagcaaggtttgatagaggcacacatcggagacatctta
gacaaggggttcgtcgatctcatgcgtcagcatcgactggaggatttgcggcgcctgcac
tcgcttctcgctcgaatggatggtttgggccgtctgtgcagcgcgttcgtgacgtacctc
aagcagcagggcacggctattgtgaaagacgaggcgcgcgataaggacatggtggatcga
ttactgacgatgaagaccgccgtggacgaggtcgtgagcaaatctttcggtcgaaccatc
gcggacggatccaatgacattttcatcaacggtgtcaaggagtcgttcgagtcattcatc
aactgtcgacaaaatgtccctgcggagctgatcgcaaaatacattgattcaaagctgaaa
agcgggagtaaaggactgagtgaagaggagttggagagaactttagataaggcgctaaca
ttgttcagatacatcgtcggaaaggatgttttcgaagtgttttacaagaaggagctctcg
aagcgtcttttgcacggcaagagcgcgagcatcgacgcggagaggagcatgatccaaaag
ttgaaggcggagtgtggcagtcagttcacgcaacatctggaaggaatgttcaaggatatc
gatctgagtcgcgaaatcatgcaatcgtttcgacagacgttcgagaacgacccaatcata
gagatgaatgtcaatgtcataactgcggggtgctggccgtcgtacccatcagtcgacgtc
aagctcccagaggagctggcgaatttgcaagagaagttcatgagtttctacctcggtaaa
cattcagggcgaaagttaacgtggcaaaactcggagggtcactgcgtcctcaaggcgcgc
ttcgacggaggaatgaaggaactcagtgtctccctctttcagtgcgtcatcctgatgctg
ttcaacgactccaagaagctctcgtacacggagattgcgcagaagactgggatggaagag
aaggaacttaaacgtgctcttcagtcactggcttgcgccaaggttcgaatcctgaacaag
gagccaaaatcgcgcgagatcaacgacgatgattctttcgaggtgaacactgcgctgaac
gagcgtctgttccgcatcaaggtcaactccatccaagtcaaggaaacggccgaggagaac
aagcagaccatggagcgggtgttccaagatcgccaacaacagatagacgccgctatcgtt
cgcgtgatgaagacgaggaagtcgctcacgcatgcgctcctcatctctgaactcatggcg
cagctcaagtttcccaccaaggcgagcgatttgaagaagcgtatcgagagtctcatcgag
cgagagtacctcgagcgcgaccgcgaagatgcgcagacgtataactacctcgcttaa
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