Ostreococcus tauri: OT_ostta04g01220
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Entry
OT_ostta04g01220 CDS
T01358
Name
(RefSeq) Rcd1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ota
Ostreococcus tauri
Pathway
ota03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OT_ostta04g01220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta04g01220
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
OT_ostta04g01220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
9834230
NCBI-ProteinID:
XP_003078657
OrcAE:
OT_ostta04g01220
UniProt:
A0A090LZP3
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Position
4:complement(210864..211718)
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AA seq
284 aa
AA seq
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MATSTASASTASVAAMETLVVALQDPETRESALLDLSKKRDMFADLAPTLWHAHGVIPAL
LQEIVAIYPLLNPPNLTNHASNRVCNALALLQCVASHPDTRGSFLAAHVPLFLYPFLNTV
SKTRPFEYLRLTSLGVIGALVKMDDTEVINFLLSTEIIPLCLRTMELGSELSKTVATFIV
QKILSDEVGLSYICATAERCYAVGTVLGGMVTQLAEQPSVRLLKHIIRCYLRLSDNARAR
DCLRQCFPDQLRDPAFTAYLKDDLATQKWLVQLLHQLGYTTAAQ
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccacggcgagcgcgtcgacggcgtcggtggcggcgatggaaaccctggtc
gtcgcgctgcaagacccggagacgcgagagtcggcgctgttggatctgagcaagaagcga
gacatgttcgcggatctcgcgccgacgctgtggcacgcccacggcgtgattccggcgctg
ttgcaagagattgtcgcgatttatccgctgttgaatccgccgaatctgacgaatcacgcg
agtaacagggtgtgcaacgcgctggcgctgctgcagtgcgtggcgagtcacccggacacg
cgagggtcgtttttggcggcgcacgtgccgttgtttctgtatccgtttctgaacacggtg
agcaagacgcgaccgttcgagtacctgcggttgacctcgctcggggtcatcggagcgttg
gtgaagatggacgacacggaggttattaatttcttactctccacggagatcatcccgctg
tgcctacgaacgatggagctcgggagcgagctgtcgaagacggtggcgacgtttatcgtg
caaaagattttgagcgacgaggtggggttgtcgtacatctgtgctacggctgagcggtgt
tacgccgtggggacggttttggggggtatggtgacgcagctcgcggaacagccgagcgtt
cggttgctcaagcacatcattcggtgctacctcagactgagcgataacgcgcgggcgagg
gattgtctgcgacagtgttttcccgatcaactccgcgatcccgcgtttacggcgtatctt
aaagacgatcttgcgacgcaaaagtggttggtgcagctgttgcaccagctcgggtacacg
acggcggcgcaatag
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