KEGG   Ostreococcus tauri: OT_ostta04g01250
Entry
OT_ostta04g01250  CDS       T01358                                 
Name
(RefSeq) Tetratricopeptide repeat
  KO
K15176  RNA polymerase-associated protein CTR9
Organism
ota  Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:ota00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ota03021]
    OT_ostta04g01250
Transcription machinery [BR:ota03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     OT_ostta04g01250
SSDB
Motif
Pfam: TPR_19 TPR_2 TPR_16 TPR_12 TPR_14 TPR_1 TPR_CcmH_CycH TPR_8 TPR_11 ANAPC3 TPR_17 TPR_4 TPR_Slam TPR_10 HAT_PRP39_C TPR_21 ARM_TT21_N DUF7017
Other DBs
NCBI-GeneID: 9834233
NCBI-ProteinID: XP_003078660
OrcAE: OT_ostta04g01250
LinkDB
Position
4:complement(<214335..>216491)
AA seq 719 aa
MRAVVRVPLINDPSECVEIDLDDLPRDAEEVATALQAELAPLETWIEVCERYLRNGDEGA
FESLMTMLCGPEIETHYAHDPHGRSSILVLYASHWTNKGGTATDKIAAEEAFIRANQLLQ
QAMGIHRKPEQSVVLGKAHLAFARGEVVEGEKLVDQALGLKDDGFDNITPMLWKASLLYK
KGKYSDALTWYRRALRAFPSAPAPVRLGIGACQYKLRDFKTAKLAFARVLKLDECNVEAM
LGLALCELSLHDIRSQQHLDSVGTAMRLLERAFSLDPHNQAVNNAIADNLLMSEEYDKVE
ALTRAAIQNNGESARNRAKAAFNQARALHARGAIPQAKALYGAATQLDESYVPPYFGLGQ
IALAAHDVKTAWSHMNKAHKEFGESITVTRMFAHLCASTGKSEQAAEMFREVVKQGGSDL
EAMLELGELLEEEDPKGSLKAYRAALKILDARGEDGPLTAIHNNIGVMSSQLGKFDEARE
AFTKALESLGGDSDQLAGKLKGANAKKVLPPGVASIAFNLALLEENQGDNAAAETRYNAL
LMAQPDYIDSILRQAKIRAERGDYDLALERTNEAIAAKSDSADAVALAGWILLKARRWSE
AEQQFATLRNLPKQNVAPNVKEKTLTHDEYAMVSAANAAYYSALKEGIVRRSDPKVMKRE
EEHYERAYSLFQKSLQKDNSNIYAANGLGIVLAERGRIDEAKTVFQLVQEGMAAKGAIN
NT seq 2157 nt   +upstreamnt  +downstreamnt
atgcgcgccgtcgtgcgcgtaccgctgatcaacgatccgtcggagtgcgtggagatagac
ctagatgatctcccgcgtgatgcggaggaggtcgcgacggcgttgcaggcggagttggcg
ccgttggagacgtggatcgaggtgtgcgagcgctacctgagaaacggcgacgaaggcgcg
ttcgagtcgttgatgaccatgctgtgcggtccggagattgagacgcactacgcgcacgat
ccgcacggacgatcgtcgattctcgtgctgtacgcgagccactggacgaataagggtggg
acggcgacggacaaaatcgcggcggaggaggcgttcattcgagcgaatcagctcttacag
caggcgatggggattcatcgcaaacccgagcagagtgtggtgttggggaaggcgcacttg
gcattcgcgagaggtgaggtggtggagggagagaagctcgtcgatcaggcgctcgggtta
aaagatgacggattcgataacatcacgcccatgctctggaaggcgtctctgttgtacaaa
aagggcaagtactccgacgcgttgacgtggtacaggcgtgcgcttcgagcgttcccgagc
gctccggcaccggtgcgcctcggcatcggtgcatgtcagtacaagctgcgcgatttcaag
acggcaaagctcgcgtttgcgcgcgtgctcaagctcgacgaatgcaacgtggaggccatg
ttgggtttggcgttgtgcgagctcagtctgcacgacattcgcagtcaacagcacttggac
tccgtcggaacggcgatgcgactcttagagcgcgcgttttcactcgatccgcataaccaa
gcggtgaacaatgcaatcgccgacaacttgctcatgagtgaagaatacgacaaggtcgaa
gcgctcacgcgcgcagcgattcaaaacaacggcgagagcgctagaaaccgtgccaaggcc
gcgttcaatcaagcccgcgctttacacgccagaggcgcgatcccacaggcgaaggcactg
tacggagcggcgacgcaattggatgagagttatgttcctccgtactttgggttgggtcaa
attgctctcgcagcgcacgacgtgaagacagcttggtcgcacatgaataaggcgcacaaa
gaatttggcgagtcgatcacggtgactagaatgttcgcgcacttgtgcgcgtcgaccggt
aagagcgagcaggcggctgaaatgttccgcgaagtcgtcaagcaaggtggaagcgacctt
gaggcgatgttggagctcggagaactgttagaagaagaggatccgaagggatcgctcaag
gcttatcgcgccgctcttaagattttagacgcacgcggtgaagatggacccctcaccgcg
attcataacaatattggggtgatgagcagtcagctgggcaagtttgatgaagcgcgtgag
gcgttcaccaaggctctagagtcgctgggtggcgactcggatcagctcgctggtaagctc
aagggagccaatgcgaagaaggtgctgccgccgggcgtagcatccatcgctttcaacctg
gccttgttggaggaaaaccaaggtgataacgctgccgcggagacgcgttacaacgcgctc
ctcatggcacagccagactatatcgattccatcttgcggcaagcgaagattcgtgctgag
cgtggtgactatgatctcgcacttgagcgcacgaacgaggcgatagctgccaagagcgat
agcgccgacgccgtcgcgctcgctggctggattttgctcaaagctcgacgatggagtgaa
gccgagcaacagtttgcgacgttgcgcaacttgccgaagcagaacgtggcgcccaatgtg
aaggaaaagacgttgacgcacgatgaatacgccatggtgagcgcggcgaacgcggcgtat
tacagtgccctgaaggagggcatcgtcagacgaagtgatccgaaggtgatgaagcgagag
gaggagcactacgagcgagcgtactcactcttccagaagtctttgcaaaaggacaactct
aacatctacgccgcgaacggtttgggtattgtcctcgccgagcgaggccgcatcgacgag
gccaagacggtgttccaactcgtgcaggaaggtatggctgcaaagggtgccatcaac

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