Ostreococcus tauri: OT_ostta04g01280
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Entry
OT_ostta04g01280 CDS
T01358
Name
(RefSeq) TATA element modulatory factor 1 TATA binding
KO
K20286
TATA element modulatory factor
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ota04131
]
OT_ostta04g01280
Membrane trafficking [BR:
ota04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
OT_ostta04g01280
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_DNA_bd
TMF_TATA_bd
CALCOCO1
CCDC39
UPF0242
Motif
Other DBs
NCBI-GeneID:
9834238
NCBI-ProteinID:
XP_003078665
OrcAE:
OT_ostta04g01280
UniProt:
A0A090LZX9
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Position
4:complement(<219876..>222101)
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AA seq
741 aa
AA seq
DB search
MASSSEPSSDARAEAREGDAVATETQVVTGTSSWGDWGSFDYNAIATQIQSRASEALGEL
DVRAVAEQIAERASEAARELEARADEAFGVSARAPGATGTEGDATAAQATAPTTSTKVVP
EPKVVPKSIPEPAMEPEQEEEEVEDEEEETIEPDGAAERLKTTLKELRFVKKQLVARENE
IARRAAQRASLDAEQEASAERAALAEQQLAETKVRVKELTEQCKVLKKKADAQASLDMLV
KEKDEIIKEVMAEGEALSKKQAEMEGIIKKLRKELRERDELHHGLSEETKTKSSSIEKLS
ADLKSAREEHAAEKSHLSKQLNEQKEYYLSKLAQAKEELTDVEVKANLAQSEDLAKELKM
AREREQSLHDQVSDLQHSLQRSSAALERQEERFKNDLAAAEERCQAAESSHEELLRRMPE
STRPLLRQIEALQLQAAENTDAWAALEKTSAARLAEAEMRAEAAAEREIAAKDRQIAIVK
EKQAADERIEKLQVELSSLKVELEAQRAKTSAESLKAARFSESFAEQEGRISAIEDEARE
RENKVKQLLAQERGKHKQLGDTWDRERAEMLANAEKLENELRAARDDAQSLQTKRGDDFG
ASQQSTQQPAAMLTGGEAGLSLAVRDTLAMLKSQLTARETELQIAQDQIKKLEQTRDSLA
NELVKSEQLVDGGGDSVSIKSLQAQYAAALEVIGERDEECDELRDRIQHLRLMLDSQASR
IQSLEAATTSLENEFHQMDSR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcgagtgaaccttcgagcgacgcgcgcgcggaggcgcgcgagggagacgcg
gtcgcgacggagacgcaggtcgtgacggggacgtcgtcgtggggggactggggatcgttc
gattacaacgcgatcgcgacgcagattcagagtcgagcgagcgaggcgctgggcgaactg
gacgtgcgggcggtggcggagcagattgcggagcgagcgagcgaagcggcgcgagagctc
gaggctcgcgcggacgaggcgtttggcgtgagtgcacgcgcgccgggggcaacggggacg
gagggtgatgccactgcggcgcaggcgactgcaccgacgacgtcgacaaaggttgttccc
gagccaaaggtcgttcctaagtccatccccgaacccgcgatggaaccggagcaggaggaa
gaggaggttgaagacgaagaggaggaaacgatcgaaccggacggtgccgcggaaaggctg
aaaacgacgcttaaggagctcagatttgtgaagaagcagcttgtcgcgcgagagaatgaa
attgcaagacgagctgcgcagcgcgcatctttggacgcggagcaggaggcgtccgcggag
cgtgcggcgctcgcggagcagcagctcgcggagaccaaggttcgggtgaaagagttaacg
gagcagtgcaaagtattgaaaaagaaagctgatgcccaggcaagcttggatatgcttgtc
aaggagaaggatgagattatcaaagaagtcatggcggaaggagaggcgctaagtaaaaag
caggccgaaatggaaggaataataaaaaagctgcgaaaggagctcagagagcgcgatgag
ctgcatcatggcttgagcgaggagacgaagacaaagagttcctcgattgaaaagctttcc
gcagacttgaagagtgcgcgtgaggaacacgcagcagaaaaatcgcacctatccaagcag
ctcaacgaacagaaagagtattatttatccaaattagcgcaggccaaggaagagctcacg
gacgtcgaggtgaaggcgaatctcgcacagagtgaagatttagcaaaggagctaaagatg
gcgcgtgaacgcgagcagagtctccatgatcaggtgtcagatttgcagcactcattgcag
cgttcgagcgcagctttagagcgccaggaagagaggtttaagaatgatctcgccgcggcc
gaagagaggtgtcaagccgctgaaagtagtcacgaggaattgctgcgtcgaatgccggag
agcacgaggccgctgcttcgccagattgaggcactgcaattgcaagcggcggagaatact
gatgcttgggccgctctggaaaagacatccgctgcgcgcttggccgaggctgagatgcgc
gccgaggctgcagcggagcgcgaaatcgcggcgaaggatcggcaaatagcaatcgtcaag
gagaaacaagccgcagacgagcgcatcgaaaagcttcaggttgagttgagctcgttgaaa
gtggagctggaggcgcaacgtgcaaaaacgtcagccgagtctctgaaggcggccagattt
agcgagtccttcgcggaacaggaaggtcgcatatcagccatcgaagacgaggcgcgagag
cgggagaataaagtgaaacagttgcttgcccaggaacgagggaagcacaagcagctcggc
gacacgtgggatcgcgagcgcgctgaaatgctcgcaaacgcagaaaagttagagaacgag
ttaagagccgctcgtgatgacgcacaatcgctccaaaccaagcgtggtgatgacttcggc
gcttctcaacagtctacgcagcaaccggcggctatgctcactggcggcgaagccggcttg
agtctggcggttcgagatacgttggcgatgctgaaaagccagctcaccgcgagagaaacc
gagctccaaatcgctcaggatcagataaagaagcttgagcaaactcgcgactcgctcgcg
aacgagcttgtgaaatctgagcaacttgtcgacggcggcggggactctgtgagcatcaag
tccctacaggcacagtatgccgccgcactggaagtcatcggggagagagacgaggagtgc
gacgaacttcgcgataggattcagcaccttcgcttgatgctcgactcccaagccagtcgc
atacagagcctcgaggccgcgacgacgtctttggagaacgaattccatcagatggactct
cgttga
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