KEGG   Ostreococcus tauri: OT_ostta04g01650
Entry
OT_ostta04g01650  CDS       T01358                                 
Name
(RefSeq) Up-frameshift suppressor 2
  KO
K14327  regulator of nonsense transcripts 2
Organism
ota  Ostreococcus tauri
Pathway
ota03013  Nucleocytoplasmic transport
ota03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    OT_ostta04g01650
   03015 mRNA surveillance pathway
    OT_ostta04g01650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ota03019]
    OT_ostta04g01650
Messenger RNA biogenesis [BR:ota03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     OT_ostta04g01650
   mRNA cycle factors
    P-body specific factors
     OT_ostta04g01650
SSDB
Motif
Pfam: MIF4G Upf2 YL1
Other DBs
NCBI-GeneID: 9833878
NCBI-ProteinID: XP_022838732
OrcAE: OT_ostta04g01650
LinkDB
Position
4:280552..283655
AA seq 1033 aa
AAAELEARRREWERSREVRARARVGNASPSRPDEQGLKSRDSSIKKNTTLIKKLRTITEE
NARALLTELSKTNVSKYVSEAALACVEGKMKSSDVNAAVEIISCMHQTYADFAAPLEEAL
RAYVVPPRPETLLKMAEGEIEALPSALQRRIKLRLFLELHIVGVCPKVKPVLDVVKELAR
LEYKIAPDLYQHTLSTLSSFAKTFAVEMLGAEPEFETNDEDFVLPADVQQEFKSTLNEYC
DRLFLVLMEAFFAMTEQEREIARLLERTGAVSESASVEFAALTKVFDGLLKGATTLAETL
GRELPEMKKKVEERVAPVGTMELHRGGVRTSSERSDLWEDEEQRHFYETLPDLQASIPAV
LLASDTQEIESETERLKREKEDITEGRTAKLQGLILRLSDCMSKDKADSICTDFCYIGAR
GGRKRLIQEFLNVRRSEIDRIPFYGRMIATLGAVFDDIAPTVSKALKEDFDYLMKKGTRA
NLGERLKNIIFIGELVKFGMITDLSTVFEVIKLLVDDFHGDNVDVLCSLFDVAGYYLTRT
QTTSKRMGSILDIFLRLKAVSQLDARQCALVDSAYYKCRPVQTIIVRKTRPPMQEYIRDL
IFSQLSKRTLEKVATQLRKLPWDETEEYLVKKLLKVCKLRHSSVPAVAALIAKLSQFYPT
LAVRCLDAVLEDVRFGLEVNETWMHQRRVANMRLLACLYKERVSHFREILDTLYLIISIG
YDGREAKDYPGDTIRLRMVCTLLENALKGHGAMNHAQRKELDRFLIFFQRYALTKDVAVD
VANDVVEVLVALNPRMKICETYEEANAECKKLIEKPNTTPGGMETVLEEDEVEGLSESEE
PEDEDMEESADEEDEESSVSEPSVDSDMDVNDEHASGDGSEASEEEQEVKVRMKLKQASM
QEQRDFEREMNKFLGTPANPALGSATRNFSKASIYKPKNTSGGTIMFKMLVKNQGKQVTK
ELNVPEGAEFVASVKEVMKAEEAELAEVKRKVLNMGYRDDEDEGSNFVPRSRHNYGWREK
PNDRREFNASRWL
NT seq 3104 nt   +upstreamnt  +downstreamnt
aggcggcggcggagctcgaggcgagacggcgagagtgggagcgatcgcgcgaggtcaggg
cgagggcgagggtggggaacgcgtcgccgtcgaggccggacgagcaagggctgaaatcga
gggattcgagcattaagaagaatacgacgctgattaaaaagttgcggacgattacagagg
aaaacgcgcgggcgctgttgacggagctgagtaagacgaatgtgagcaagtacgtcagcg
aggcggctttggcgtgcgtggaggggaagatgaagagctcggacgtgaacgcggcggtgg
agatcatctcttgcatgcaccaaacgtacgccgactttgccgcgccgctcgaagaggcgc
tgcgcgcgtacgtggtcccaccgaggcccgagacgctgttgaagatggccgagggtgaga
tcgaagcgctaccctcggcgttgcaacgccggatcaagctgcgtctgtttctcgaacttc
acattgtcggcgtgtgtcccaaagtgaagcccgtgctcgatgtggtgaaggaattggcgc
gtctcgaatacaaaatcgcgcctgatctgtatcaacacaccctgagcacgctctcaagct
tcgcgaaaactttcgcggtagagatgctcggcgccgagccagagtttgagacgaacgacg
aagatttcgttcttccagcggatgttcagcaggagttcaagtcgacgctcaacgagtact
gcgacagactcttcctcgtgctcatggaggcattttttgccatgacggagcaagagcgcg
agatagcacgattgctagaacgtaccggagcggtgagcgaatctgcatctgtggagttcg
cggcgctcacgaaggtttttgacggattgttgaagggggcgacgactcttgccgagacgc
ttggacgagagcttccagagatgaaaaagaaggtcgaggagagggttgcacccgtgggaa
caatggaactacatcgaggtggcgtgcggacatcgagcgaacgaagtgatttgtgggaag
acgaggagcagcggcacttttatgagacacttccagatttacaagcctccataccggcgg
tgttattagctagcgatacgcaagagatcgagtccgagaccgagcgactcaagcgggaaa
aggaagacatcactgagggacgtactgcaaagttacagggattaatcttgcgactatccg
actgcatgtcaaaggacaaagctgattcaatttgcacagatttttgttacatcggagctc
gaggtggtaggaagcgtttgattcaagagttcctgaacgttcgacggtcggagatcgatc
gcattcccttttatggtagaatgatcgcaactctcggggccgtttttgatgacatcgctc
ccaccgtgtcaaaggctctcaaggaggattttgattatctcatgaagaagggtacgcgcg
caaatcttggcgagcggttgaagaacatcattttcatcggcgagctcgtcaagttcggga
tgataacggatttgagtacggttttcgaagtcattaaactactcgttgacgattttcacg
gagacaacgtcgatgttctgtgttctctgtttgatgtagccggttactacctcacgagaa
cacagacaacgtcaaagcgaatgggaagtattttggacatcttcttgcgactgaaagccg
tgagccaactcgatgcgcgtcagtgcgcactggttgacagcgcttattacaagtgcagac
cagttcagacgatcatcgtacgtaaaactcggccgccgatgcaagagtacatacgagatc
tcattttttctcaactgtcaaagcggacgttagagaaagtggcgacgcaactccgaaagc
taccgtgggacgagacggaggaatatctcgtgaagaaattactcaaggtgtgcaagctca
ggcattcatcggtaccagccgtcgctgcgctgattgcaaagttgtcccagttctatccga
cgcttgctgtgcgatgtctggacgctgtgctcgaagatgttcgattcggactagaagtaa
acgagacgtggatgcaccaacgacgtgtcgcaaatatgaggcttcttgcatgtttgtaca
aggaacgcgtctcgcacttccgcgagatccttgacacgctctacctgataatttctatcg
gttatgatgggcgcgaagcgaaggactacccgggcgacacgattcgcctccgcatggttt
gtacacttttagaaaacgcccttaaaggccacggtgcgatgaatcacgcgcagcgaaagg
aactcgatagatttctcatcttcttccagcgctatgccctaacaaaggacgtcgctgtag
atgttgcaaacgacgtcgtggaggtgctggtggcgttgaatccgcgaatgaaaatctgtg
agacttacgaggaagcgaatgccgagtgtaaaaaacttatcgagaagccaaatactacgc
ctggtggcatggagaccgtattggaagaagatgaagttgaggggttgagtgagagtgagg
aacctgaggatgaagacatggaggagtcggcggatgaggaggacgaagaatcatccgtta
gcgagccctcagtcgactcggacatggacgtcaatgatgaacatgcgtctggtgacggat
ccgaggcttccgaagaggagcaggaagttaaagttcgcatgaagctcaagcaagcttcga
tgcaagagcagcgagacttcgagcgcgaaatgaataaattccttggcacacctgctaatc
cggcccttggtagtgctacacgaaacttctcgaaagcgagtatttacaaaccgaagaaca
cttctgggggtacaatcatgttcaaaatgttggtaaagaaccagggaaagcaggtcacga
aggaactcaatgtacctgagggcgctgagtttgtggcgagcgtcaaggaggtcatgaaag
ctgaagaggctgagctcgctgaagtgaagcgcaaagtgctcaatatgggataccgcgatg
acgaagatgaggggtcaaatttcgttcctagatcgcgtcataattacggctggcgtgaga
aaccaaacgaccgtagagaatttaatgcgtcgagatggctgtag

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