Ostreococcus tauri: OT_ostta04g02770
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Entry
OT_ostta04g02770 CDS
T01358
Name
(RefSeq) Helicase, C-terminal
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta04g02770
03036 Chromosome and associated proteins [BR:
ota03036
]
OT_ostta04g02770
Enzymes [BR:
ota01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OT_ostta04g02770
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
Pre-60S particles
Helicases
OT_ostta04g02770
Chromosome and associated proteins [BR:
ota03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
OT_ostta04g02770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Gly_acyl_tr_C
CMS1
Motif
Other DBs
NCBI-GeneID:
9833913
NCBI-ProteinID:
XP_003078811
OrcAE:
OT_ostta04g02770
UniProt:
Q01AV7
LinkDB
All DBs
Position
4:482629..484815
Genome browser
AA seq
693 aa
AA seq
DB search
MGKTKDKAAKEAKKEKKEKKSSKERTVEAAAATETKKKRKASDEEDESKREKSRARREED
ERAEGDLELGTPEPEEPNPLALDNFKGLTDPVKTTLRKKGYDALFQIQAETLEIALGGRD
VVGRARTGCGKTLAFVLPIIELMAKMSPMPANGRRVQGRRPMCVVLAPTRELAKQVFADF
DWIGNSYGFKSLCVYGGAPYREQEMGLRSGVDIVIGTPGRMKDHLERKTLMMTDLKFRVL
DEADEMLNMGFVDDVETILKSSGDVQTLLFSATLPSWVKDISKRFLKPNYSTVDLVGDEK
QKASGAVQHMLLPCQWSDRVDLVCDVIRSKAPGGGRVIVFCDTKRDCGELCDNLQKEIPK
GAKALHGDVSQSQREVVLSLFREDKFQVLVATDVAARGLDITGVELVIQCEPPKDAETYI
HRSGRTGRAGATGISVTLCTPRNEWAVPNIERKGGFKFIRIGPPQPAEMAKAAGKIAGEQ
IRKVHKGAAKLFMDVARDLLEGEDSDSEEGRDPVEVLAMAIAKLAGHGELRQRSLLTSHS
GQTTLLFTANGVDIRTPTYVWNFLRQRMDESELQLRRLTLSMDNKAAVFDVPSELADKFV
ALSEPATSGKTAVTIIECAELPELSQRPQAREGGFGGGRGGGGGRFSGRGGNYGGGRGSP
GGRFGGRGSPGGRAGGRGGGGRFSGGGRGRGRY
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagacgaaggataaagcggccaaggaggcgaagaaggagaagaaggagaagaag
agctccaaggagagaacggtggaggcggcggcggcgacggagacgaagaagaagcgaaag
gcgagcgatgaggaggatgaatcaaagagagaaaagtcgcgcgcgcgaagagaggaggac
gagcgggcggagggagatctcgaactcgggacgcccgaaccggaggagccgaatccgttg
gcgttggataattttaagggtttgactgatccggtgaagacgacgctgcggaagaagggg
tacgatgcgttgtttcagattcaggcggagacgctggaaatcgcgctcggcgggcgcgac
gtcgtgggacgagcgaggactggatgcgggaagacgctggcattcgtgctgcccatcatc
gagttgatggccaagatgtcgccaatgccggcgaatggacgacgggtgcagggcagacga
ccgatgtgcgtggtgttggcgcctacgagagagctcgcaaagcaagtcttcgcggatttc
gactggattggaaactcgtacggattcaaatctctgtgtgtgtacggcggcgcgccgtat
cgcgagcaagagatgggtttgcgaagcggtgttgatatcgtgatcggtaccccgggacgc
atgaaggatcacctcgagcgcaagacgctgatgatgacggatctgaagtttcgcgtgctc
gacgaagccgacgaaatgttgaacatgggtttcgtcgacgatgtcgagaccattttgaag
agctctggtgacgtgcaaacacttttgttctccgccacgcttccatcgtgggtgaaggac
atctccaagcgcttcctgaagcccaactactcgacggttgacttggttggtgacgaaaag
caaaaagcgagcggcgccgtgcagcacatgttgttgccgtgccagtggtccgatcgagtt
gacctcgtatgcgacgtcattcgatcgaaagcccctggtggtggacgtgttatcgttttc
tgtgataccaaacgcgattgcggcgagttgtgcgacaacctgcaaaaggaaatcccgaag
ggggcaaaggcgcttcacggcgacgtcagccaaagccaacgcgaagtcgtcctttcgttg
tttcgcgaagacaagttccaggttttggtcgcgaccgatgtcgccgctcgcggtttggac
atcacgggtgtggaacttgtcattcagtgcgaaccaccgaaagatgcagagacgtatatt
caccgctcggggcgaaccggaagagcgggcgcaactggaattagcgtcaccctttgtacg
ccgcgtaacgagtgggctgtaccgaacatcgagcgtaagggaggattcaagttcattcga
atcggaccaccgcaaccggcggagatggccaaggctgcggggaagattgccggcgaacaa
attcgcaaggtgcataagggtgccgcgaagctcttcatggatgtcgcgcgcgatttactc
gagggtgaggacagcgacagcgaagagggtcgcgatccagtcgaggtacttgcgatggcg
atcgccaagcttgcaggtcatggagaacttcgtcagcgctctctattgacgtcgcactca
gggcagacaactttgctcttcaccgccaacggcgtcgatatcaggactccgacatatgtc
tggaacttcttacgtcaacgcatggacgagagtgagcttcaacttcgtcgtctcacgttg
agtatggataacaaggcggccgtgttcgacgtaccatcggaactcgccgataagtttgtc
gcgctctcagagccagcgaccagcggtaagaccgctgtcaccatcatcgagtgcgctgag
ttgcctgaattgagtcagcgaccgcaagcccgcgaaggtggttttggtggcgggcgcggc
ggtggtggaggacgattttctggtcgaggtgggaactacggtggcggccgaggctctcct
ggtggtcggttcggtggacgaggttctccaggcggacgtgcgggcggtcgcggtggcgga
ggacggttctcgggcggaggacgaggaagaggtcgttattag
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