Ostreococcus tauri: OT_ostta04g02860
Help
Entry
OT_ostta04g02860 CDS
T01358
Name
(RefSeq) unnamed product
KO
K14311
nuclear pore complex protein Nup188
Organism
ota
Ostreococcus tauri
Pathway
ota03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OT_ostta04g02860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta04g02860
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
OT_ostta04g02860
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
9833925
NCBI-ProteinID:
XP_003078820
OrcAE:
OT_ostta04g02860
UniProt:
Q01AU8
LinkDB
All DBs
Position
4:complement(<504719..>510454)
Genome browser
AA seq
1911 aa
AA seq
DB search
MSFSFGIPPSTDAASTPAAVTPTPTSTAVAIAQPSTPNATALPHARALFYEIDEAVSRGS
ALRASTARALSDALGHLSSVHAGYEPFSESSARAINGGSVEYGGKTLKVSGTSASVSAAL
GKRLGLDATQAYVMLRRTMEESGMKRPNEASEEVVREVMRFYFRERLGTIKCAHALLTQA
ATCDGGDAIESAVGKLLESKFEDNVFDAIERHMSGSTASGPEGASSADAAAWAGQALEET
VALLEVLFLLYYNRVKCSPQRFLKLASVLQNRALRRAPAAAIELEAHAPLAHVNAFVDDI
RALCNVTLIAAMDLENLVDRFSGKSLKVHGFLEPHALQSITGMMEKWQSDTAHGPTLLAW
STFLTLLPQDAEFMPGNFSIEMMHQKANECGIAALLRLLDAEQLRGDDATVTLHKSVLKN
TFSTILAAYDMLPVHRLPPSELGQIIDVLTKLLSDQPVLCEQFWAGAREDGQEAPLFALL
EGCRERFPCESVPLLRMLAALCEGHRSAECALSYLAQLPTVALPIPPPNVLQHGIRATAE
AEMDVDAGFVRGPVTATHRLTSSLIPGGYIEVGMHGLAIDSSSQTSPLIVWATPADGLHL
CLTRLSSLTSAGLKGELSSAQINEMDATVLFVSKVLTNAPSFARPMLSCDVSVSVPKGAP
ADVLTALSLALHVCSKSLSTDEGVQRTATVLRALVPLAAAEPSRTIEEVLEAPLLSGTPG
TGVPGLIRAIRDSESRLGEYPLTLALLDLVETLLEHGGLGDRLEAIVDHTLQEVAVRHVQ
WRYKFKAEKWLVHSGIQRVIYQIFKPRHGEFAEKLRKKALSYLITDRAICFGSLAPLVYD
ANALRKLHEEGGAPRAEEVTALEEAIARVLKSLPLIVHYAGENFGGFLERMLLIETSNDG
APFASSIASYAGYPYAAACYPLAIPALVPLCAVATPTPLTATLDKRDQYEILKSMQKMFE
QADEEPDAVSDVADLLSAGIVNQPEWVNMILIPEEPKEEAASTTPALPTTPSPVALPAPG
TPTPAPGVQGALALATGTATSTTTLAPSTSSQQEEKLDGALSLIWKLLQDTSKLRSQSPR
CLSALMRTLNTLWRHQPPLGAAVASLKAHDGALWTRLVECLDAPSPSDATSLAHNLETVS
SIFSLLAIEIDASTSDTESTNSTFVSKAKEWFTSSRITAWVDASISGESCSVDRCETQYA
AQAFVLQCVLALERQEMTAQRVPLMADATLRSMCGQIRDALLAHPSAKDLRSSGASNVAI
LEAIAQESAAKAPGSIISNDPVHKLLVVAREMHVEAAVLAPAPLGITGAAEYGESYLYDS
SWIRIASGCSENDVDEQWGAPEGVLAQAGRVMSGRLAETCLKSSVADARAAAICSLRSFI
SAAGSGELPKMHAGVFEIPGMGASRSVLDGLSRETRKKLVLDVAVRLSAVMDTDSASSPA
YVSPLAIELAGLLGVVTQLWSVLVSRSTTPTPSEDDLEPVTRVINTVTTILASRMNSSGT
PIRDAVPLVHPLLTAMLFAIRAWGAGALSARTVQPSYELGQSTIPLIPLICHAAATPSEA
KSKATSSVSLMLLEDIARDLLPTSALLQVLSAHKILPPLKVATGDDDADSVTIAALNTCL
SLSKSAQGAEILLASDTIRQLAVLCVESKDVKASGEGMAHDIYCSSLRVTAMLAGARRDA
EIGADLMRFCTALETRLLAAMSPSEITLASLREAEITALFFSRLSSSFGAQWQVTSPEAQ
LRCRVACAMFLRWIAAPQVVNGLRCPRHTKANEAMAAKPPATRARQAWFQATARGDSVRD
PSSPLLGTAIAGSPIADASTRKTGNAYSESVALMLYRVARSSCEFLATFPRALDACALGF
DVCASARDQCDAILKDDLGSSAQNDDEKILARVLDGLRSAVDAVEAVERGR
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttcgttcgggattccgccgtccacggacgcggcgtcgacgcccgcggcggtg
acgccgacgccgacgagcaccgccgtcgcgatcgcgcaaccgtcgacgcccaacgcgacc
gcgctaccgcacgccagggcgttgttttacgaaatcgatgaagccgtttccagagggtct
gcgcttcgcgcgtccacggcgcgcgcgctgagcgacgccttgggccacctgtcgtcggta
cacgccgggtacgagccgttttcagagtcctccgcgcgagcgatcaacggcgggagcgtg
gagtacggtgggaagacgctcaaggtgagcgggacgagcgcgagcgtgagcgcggcgctg
ggcaagcgcttggggctcgatgcgacgcaggcgtacgtgatgcttcgcagaacgatggag
gagagtggaatgaaacgaccgaacgaggcgagcgaggaggttgtgcgagaggtgatgcgt
ttttatttcagggagcgtttgggaacgatcaagtgcgcgcacgcgttgttaacgcaggcg
gcgacgtgcgacggtggcgacgcgattgagagtgcggtgggtaaattgttggagtccaag
ttcgaggataacgtatttgatgcgatcgagcggcacatgagcgggtccacagcgagcgga
cccgagggggcgagctcggcggatgcggcggcgtgggcgggacaggcgctcgaggaaact
gtcgcgctgctcgaggtgcttttcttgctctattacaaccgagtgaagtgctcaccgcaa
cgttttttgaagctcgcgtcggtgctgcagaacagggcgcttagacgcgcgcctgcggcg
gcgatcgagttggaggcacacgcaccgctggcgcacgtgaacgcattcgtggatgacatt
cgagctctgtgcaatgtcaccctgatcgcggccatggatttagaaaatttagtcgatcga
ttttccgggaaaagtctcaaggtgcacggttttttggagccgcatgcgctgcaatccatc
acgggaatgatggaaaagtggcagagtgacacggcgcatgggccgacgttactcgcatgg
tcaacgtttctaacgctcttaccacaagacgctgagttcatgccgggtaacttttcgatt
gaaatgatgcatcaaaaggcgaacgagtgcggtatcgcggcgctcttacggctactggat
gcggaacagttgcgaggcgacgacgccaccgtcacgttgcacaagagcgttcttaaaaac
acgttctcgacgatcctcgcggcgtacgacatgctgccagtgcaccgcttacccccgtca
gagctcggtcagattatagacgtcctcacgaagttgctctccgatcagccagttctttgt
gaacagttttgggccggggccagagaggacggacaggaagcgccgctttttgcgctctta
gagggttgccgagagaggtttccgtgcgagtctgtacctcttttgcgaatgcttgcggca
ctctgcgaggggcatcgatcggcagagtgcgctttatcgtatctggcgcagctaccaacg
gtagctttgccgattcctccacccaatgtcttacaacatggcatcagggcgaccgccgaa
gctgagatggacgtagacgctggcttcgtccggggtccggtaaccgccacgcatcgtctg
acgagttcgctcattccgggtgggtacatcgaagtcggtatgcatggactggcgattgat
tcaagttcgcagacgtccccgttgattgtgtgggctacgcccgccgatggtttgcatctt
tgccttacgagactttcgtcattgaccagtgcgggtctgaaaggagaattgagctcagca
cagattaacgagatggatgcaactgtactgtttgtttccaaggtgttgacgaatgctccg
tcttttgctcggccaatgctgtcctgcgatgtgtccgtatctgtcccgaagggtgcgcct
gcggacgtgctcacggctctctcacttgcccttcatgtgtgcagtaaatcgttatcgacg
gacgaaggggtgcagagaacggcgacagttctacgagcgctagtgccgttggccgctgct
gagccctcgcgcacgattgaggaggtgctcgaagcgcctctgttgtccggcacgcctggt
actggcgtgccaggattaattcgcgctattcgcgatagtgaatctagacttggtgagtac
ccgctgacgttggcgttgctcgatctggtggagacgctccttgaacatggaggtctcggt
gataggttagaagcgatcgtagatcacaccttgcaagaggtggcagtgcggcacgtgcag
tggaggtacaagttcaaagccgagaagtggctcgttcactcggggatccagcgagtgatt
taccagattttcaaacccagacacggcgagtttgcggaaaaacttcgtaaaaaagcactt
tcgtacttgatcacggacagagcgatctgcttcggatcgttagcgcctctcgtatacgat
gcgaatgcactgcgcaaattgcacgaggagggcggtgccccacgagcagaagaggtgacg
gccctcgaggaagcgatcgctcgagtactgaaatctcttccactcatcgtgcattacgca
ggtgaaaatttcggtggctttttggagaggatgctactgatcgagacgagtaacgacggc
gcgccgttcgcgagttcgattgcatcctacgcaggatatccgtacgcggccgcgtgttac
ccgctcgccattcctgcgctcgtgccactgtgcgcggtggccacaccgacgcccttgacg
gccacgctcgataagcgcgaccagtatgagattttgaagtcgatgcagaaaatgttcgaa
caggctgatgaggagccggatgccgtttcagacgtggccgacttgctcagcgcgggtatc
gtgaatcaaccagagtgggtgaacatgatactcattcctgaggagccgaaggaggaggcg
gctagcacaacacctgcgttgccgacaacaccgtcgcccgtagcgctgccagctccgggc
acaccgacgcctgctccgggagttcaaggcgcgctggcgctcgcaaccgggacggcgacg
tcgaccaccacgctggcaccttcaacttcctcccagcaagaggagaaactcgatggcgcg
ctgagcttgatttggaaattgcttcaagatacatccaagctgcgttcgcagtcgccgcga
tgcttatcggcgttgatgcgcactctcaacacgctctggcggcatcaaccacctctgggc
gcggcagtcgcctcgctcaaggcgcacgacggagcattatggacgcgattagtggagtgc
ctggatgcaccgtcgccgtcagacgcgacgtctctggctcataatctcgagacggtcagt
tcaatcttctctctgctcgcgattgaaatcgacgcgtcgacttcagataccgaatctacg
aactcgacatttgtttccaaggcgaaggaatggttcacgtcgtcgcgcattactgcatgg
gttgacgcttctatctcgggcgagagctgctctgtcgatagatgcgagacgcaatatgca
gctcaagcgttcgttttgcagtgcgtgcttgccttggagcgtcaagagatgacggcgcag
cgagtacctttgatggcagacgcaaccctgcggtcgatgtgcggacagattcgagacgcc
ttgctggcacatccctcagcgaaggatttgcgatcgtcgggagcgagtaacgtggcgata
ttggaagctatcgctcaagaatcggccgcaaaggccccggggtcgattatttcaaacgat
ccggtgcacaagttactagtcgttgctcgggagatgcatgtcgaggccgcggtgctcgct
cccgctccacttggaattactggcgctgctgagtacggggaatcgtatctctacgattct
tcgtggattcgcatcgcctctggttgctcggaaaatgacgtggacgagcagtggggtgca
cctgaaggcgttctagcgcaagcaggacgcgtcatgagcggtagactcgctgagacgtgc
ctgaagtcttcagtcgccgacgcgcgcgcggcagcgatttgttccttgaggtctttcatc
tcggctgcagggagcggcgagctgccgaaaatgcacgctggagtgttcgaaatcccggga
atgggagcgtctaggagcgttctagatggtttgtcgagagagaccagaaagaagcttgtg
ctagatgtcgcggtacgactcagcgccgtcatggacaccgacagcgccagctcgccggcg
tacgtcagcccgttggcgatcgagttggctggtttattgggtgtcgttacacaactctgg
agcgtcttagtatcgcgctcgaccactccgacgccctcggaggacgacttggagcccgtg
actcgagtcattaacaccgtgacgacgattttagcgtctagaatgaactcgtcggggaca
ccgatccgtgatgcggttccgctcgtccatccgttgttgactgcgatgctgtttgcaatt
cgagcgtggggcgcgggcgcactctcggctcgcacggtgcagccaagctacgaactcgga
cagagcacgatcccgctcattccgctcatctgccacgcagcggcgacgcccagtgaggca
aagagcaaagcgacgtccagcgtatcgttgatgttgctcgaagacattgcgagagattta
cttccgacgtcggcgctgttgcaagtactcagcgcgcacaagattcttccgccgctcaag
gtggcaacgggagatgatgatgctgacagcgtcaccatcgccgctctcaacacatgtctg
agtttatcaaagagcgcacagggcgcagaaatcttgctcgcgtcagacaccattcgtcag
ttggctgttttatgcgttgaatcgaaggacgtcaaggcgagcggtgagggtatggcgcac
gacatttactgttcctccttgcgagtgactgcaatgctcgccggggcacggcgagatgcc
gaaataggcgcggacttgatgcgtttctgcacggcgttggagactcgtttgctcgccgcg
atgtcgccgagtgagatcacgctcgcgtcccttcgcgaagctgagattacggcgctcttc
ttcagtcgtctctcgtcgtcgttcggcgcgcagtggcaggtgacgtcgcccgaggcacaa
ctgcgatgccgcgtcgcgtgtgctatgtttctccgatggatcgctgccccgcaagtcgtg
aacggattgcgttgtcctcgtcatacaaaggcgaacgaagcgatggcagccaaacccccg
gcgacgcgcgcccgccaggcatggttccaagccacggcgagaggcgactcggtgcgagac
ccgagctcgccccttcttggcaccgccatcgcgggctccccgatcgctgacgcaagcaca
cggaagactggaaacgcgtactccgaatcggttgcgttgatgctgtaccgcgtcgcccga
tcgtcgtgcgaattcctcgccacctttcccagagcgctcgacgcgtgcgcgctcggtttc
gacgtctgcgcgagcgcgcgcgaccagtgcgacgccattctcaaagacgacctcggttca
tcggcgcaaaacgacgatgagaaaatattagcgcgcgtcctcgacggcctcagatccgcc
gtcgacgccgtcgaggccgtcgaacgcggacgatag
DBGET
integrated database retrieval system
