Ostreococcus tauri: OT_ostta05g00150
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Entry
OT_ostta05g00150 CDS
T01358
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K10756
replication factor C subunit 3/5
Organism
ota
Ostreococcus tauri
Pathway
ota03030
DNA replication
ota03410
Base excision repair
ota03420
Nucleotide excision repair
ota03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OT_ostta05g00150
03410 Base excision repair
OT_ostta05g00150
03420 Nucleotide excision repair
OT_ostta05g00150
03430 Mismatch repair
OT_ostta05g00150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ota03032
]
OT_ostta05g00150
03036 Chromosome and associated proteins [BR:
ota03036
]
OT_ostta05g00150
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta05g00150
DNA replication proteins [BR:
ota03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
OT_ostta05g00150
DNA Replication Termination Factors
ELG1-RFC complex
OT_ostta05g00150
Chromosome and associated proteins [BR:
ota03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
OT_ostta05g00150
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
OT_ostta05g00150
Check point factors
HRAD17(Rad24)-RFC complex
OT_ostta05g00150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
AAA
AAA_22
APS_kinase
Sigma54_activ_2
CHB_HEX
ABC_tran
Motif
Other DBs
NCBI-GeneID:
9834606
NCBI-ProteinID:
XP_003079111
OrcAE:
OT_ostta05g00150
UniProt:
A0A090N3B1
LinkDB
All DBs
Position
5:complement(<22399..>23475)
Genome browser
AA seq
358 aa
AA seq
DB search
MSAALWVDKHRPHELGDATTVNARTAKHLKLLIARGDCPHLFFHGPSGAGKKTLALAVLR
EIFGAGVEKVKLENKTWKIDQNDRGVEVELAMMSSNFHCEMNPSDCGSKDRYVVQEVIKE
MARSRPIDADGIEGYKVLVLTEVDRLSREAQYGLRRTMEKYSASCRLFLIAERPSKVMDA
LQSRCLPIRVPGPSIEEIENLLHEVAKKEKLELPPELATRVAQASGRNMRRALLTLETCR
VMNYPFKPTQAVQTTDWELYINQIGSEILAEQSPSRLLQVRGRLYELFVNCIPPEIILTN
LAKALMKRVDVEVKHQICFWAAHFEVRMQRGGKPIMHLEAFVAQFMALYKSHLVAAFG
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggcgctgtgggtcgataagcaccgaccgcacgagctgggagacgcgacgacg
gtgaacgcgaggacggcgaaacatttgaaactcttgatcgctcgaggggactgcccgcat
ctgttctttcacggaccgtcgggcgctgggaagaagacgttagcgctcgcggttttacgg
gaaatctttggcgctggggtggagaaggtgaagctggagaataagacgtggaagattgac
cagaacgatcgcggcgtcgaggtggagctcgcgatgatgtcgagcaactttcactgcgag
atgaatccgagtgattgcggaagtaaggatcggtacgtcgtgcaggaggtgatcaaagag
atggcgcgatcgagaccgatcgacgcggacggaatcgaggggtacaaagttctcgtcctc
accgaggtggaccggctgtcgcgcgaggcgcagtacggcttgcgcagaacgatggagaag
tactccgcgtcgtgtcggttgtttctcatcgccgagcgtccgagtaaagtaatggatgct
ttgcagtctagatgcttaccgatcagagtgccaggaccgagcattgaggaaattgaaaat
ttgttgcacgaagtggcgaagaaggaaaagctagagctcccgcccgagctcgccacgcgc
gtggcgcaggcgagcgggcgcaacatgcgtcgcgctttattgaccctagagacgtgtcga
gtgatgaattacccgttcaaaccgacgcaagcggtgcaaacgacggattgggagttgtac
attaaccagattgggtcggaaattttagccgagcaatcgccgtcgcgtctgttacaagtg
cgcggtcgcctgtacgagctcttcgtgaactgcattcctcccgaaatcatcttgacgaat
cttgccaaggcattaatgaagcgcgtggacgtcgaggtgaagcatcaaatttgtttctgg
gccgctcactttgaggttcgcatgcagcgcggcggcaagcccatcatgcacctcgaggct
ttcgtcgcgcagttcatggccttgtacaagagtcacttagtggcggctttcgggtga
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