Ostreococcus tauri: OT_ostta05g00310
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Entry
OT_ostta05g00310 CDS
T01358
Name
(RefSeq) Breast cancer type 1 susceptibility protein (BRCA1)
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ota
Ostreococcus tauri
Pathway
ota03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OT_ostta05g00310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta05g00310
04121 Ubiquitin system [BR:
ota04121
]
OT_ostta05g00310
03036 Chromosome and associated proteins [BR:
ota03036
]
OT_ostta05g00310
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta05g00310
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
OT_ostta05g00310
Ubiquitin system [BR:
ota04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
OT_ostta05g00310
Chromosome and associated proteins [BR:
ota03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
OT_ostta05g00310
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
OT_ostta05g00310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-C3HC4_3
BRCT
zf-RING_2
zf-HC5HC2H_2
zf-C3HC4
zf-RING_5
PHD_NSD
zf-RING_6
zf-C3HC4_2
RTT107_BRCT_5
zf-RING_10
zf-RING_UBOX
U-box
zf-C3HC4_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
9833316
NCBI-ProteinID:
XP_003079127
OrcAE:
OT_ostta05g00310
UniProt:
A0A090M6R3
LinkDB
All DBs
Position
5:complement(47348..49117)
Genome browser
AA seq
589 aa
AA seq
DB search
MSIDGALAAFREHVTTSLKELGDHLACAVCLSLPKTPIKLGCSHYLCDECAKRVFGNKKS
TCPTCRTPCTKRESRMDERMKSIVDSFTNVLAAVSGAMGECDELPFGSQIPKEQLELHGA
VAQRRTSMSLVKGLRAGMPGESTLRRAVEMIWEDKETERTQGRTKERASTSQACETADAE
PIYATWNGPLIDPNAEVEGITCAFCKRGSEVGEAVVAFEEKVSGKKKVEYCHETCAMWAP
LTTSAADGSLVNVCKEVHRARRLRCGVCKKTGAPSGCKIGTCRQSFHIWCARLQHGTTFD
EQGFSVTCPVHSITPTTPSAKRSSQAPFLSTSAKHRRLGSIGPSDTSYEMVALTKPSIAG
SFLNDEEKKTIEKFCAKFDCEFEQSVSDRTTHVVMSKSKINADRCLKKRSDKFFGGLTRG
CWIVSSTWLQASLKENRIVDAEDHEVLGDTRGNQGGPRRARLNKGVKIFSDTHLIYLGKV
QSQQQLETSMQLARVDGAIVTRIEDAKISSDELSEVLNLNDTSRVVVVVNEEQSNKAARA
RYAEEFIPFAKRLSKAAEAIVTHDFVLDSVCRREVMDLGDRSIEALESA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgatggcgcgctcgcggcgtttcgagagcacgtgacgacgtcgttgaaagag
ctgggtgatcacttggcgtgcgcggtgtgcctgtcgctgccgaagacgccgataaagctt
gggtgctcgcactacctgtgcgacgagtgcgccaaacgcgtcttcgggaataagaaatcg
acgtgtccgacgtgtcgaacgccgtgcacgaagcgggagagtcggatggacgagcgaatg
aagtctatcgtcgattcgtttacgaacgtcttggccgccgtgagcggtgcgatgggtgag
tgcgatgagctcccgtttggttctcaaattccaaaggagcaattggagctgcacggcgcc
gtcgcgcagagaaggacgagcatgtcgctcgtgaaggggctgcgagcgggtatgcccggt
gaatcgactctgagacgggcggtggagatgatttgggaggataaggagactgagaggacg
cagggaaggacgaaggagcgcgcgtcgacgtctcaagcgtgcgaaacggccgatgcggag
ccaatatatgcgacatggaatgggccgctgatcgatccgaacgccgaggtcgaaggcatt
acgtgcgcgttttgtaagcgagggagcgaagtcggtgaggccgtcgtcgcgttcgaggag
aaagtttcagggaagaagaaggttgagtactgtcacgagacgtgcgcgatgtgggctcct
ctcacgacgagcgccgccgacggctcgctcgtaaatgtgtgcaaagaggttcatcgcgcc
aggcgactgagatgtggcgtgtgcaagaagacgggcgcgccgtctggatgcaagatcggc
acgtgcaggcaatccttccacatttggtgcgctcgattgcagcacggtacgacgttcgac
gaacaaggcttctctgtgacgtgtccggtgcactcgatcacgcctaccacgccctcagcg
aagagatcatcgcaggcgccttttctgtcgacgtcggcaaaacatcgacgactcggttcg
atcggtccgtcggacacgagctatgagatggtcgcgcttacgaaaccatccatcgctgga
tcgttcctgaacgacgaagagaagaagacgattgaaaagttttgtgcaaaattcgattgc
gagttcgaacaatcggtcagcgatcggacgacgcacgtggtgatgtcaaagagtaagatc
aatgccgaccggtgccttaagaaacgatcagacaagttttttggtggactcacgcgcggt
tgctggattgtctcgtctacgtggcttcaagccagtctcaaggagaaccgtatcgtggat
gcggaagatcacgaggtactgggtgatacacgcgggaaccaaggcggacctcgtcgagcg
cgtctgaacaagggtgtgaagatattctcagacacgcacctcatctatctcggcaaagtt
cagagccaacagcagctcgagaccagcatgcagcttgctcgagttgatggcgccatcgtc
acgagaatcgaagacgcgaagatctcttcggatgaattgagcgaagttctgaacttgaac
gacacgtcgcgcgtcgtggttgtcgttaacgaggagcaatcgaacaaggcggcgcgagcg
cgttacgccgaagaattcattccctttgcgaagcgactgtccaaggctgccgaggcgatc
gtcacccacgacttcgtcctcgactctgtctgtcgccgcgaggtgatggacttgggagat
cgttctatcgaagcgctggaaagcgcgtga
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