KEGG   Ostreococcus tauri: OT_ostta05g00380
Entry
OT_ostta05g00380  CDS       T01358                                 
Name
(RefSeq) G-protein beta WD-40 repeat
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ota  Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:ota00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ota03041]
    OT_ostta05g00380
Spliceosome [BR:ota03041]
 Complex B
  Other components
   Complex B specific factors
    OT_ostta05g00380
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_DCAF12 LisH_TPL DUF1513 WD40_like Beta-prop_NOL10_N WD40_RFWD3 ANAPC10 VPS8_N zf_topless
Other DBs
NCBI-GeneID: 9835182
NCBI-ProteinID: XP_003079135
OrcAE: OT_ostta05g00380
UniProt: Q019Y2
LinkDB
Position
5:57291..58895
AA seq 534 aa
MSVAGVEDTLEVDALDVVKIVLQWARESGLENTAEALSRETATTLNCVDDLETFRHDITR
GRWDVVLPSLAKLSMPKNVLEDAYEHVTLEMCELGERDTARAILRQSNVMKTMREEQSRR
HARLEHYVSAIDFNASDAYGGTTKEKRREKIAEALCREVCVVPPSRLLALIGQALKWQRS
TGALPPGTAFDLFRGQAPAEDEEEEQCPTTSHKRIKFSKKSFPECASFSACGGMLATGSA
DGFIEIWDPYSGKLRKDLKYQADDALLMHDDAVLAISFSKDSEMVASGSQDGKIKVWRVS
TGSCLRKFEKAHQEGVTSVVFSKDGSQVLSGSFDGLIRVHGLKSGKLLKEFRGHTSYVNS
VAFTEDEAHVLSASSDGSVRVWDAKTGECKHTFRPPPPVNPNKDDDVEDTYQTGTIPAVT
SAVPNPKNDAQIIVTSKTNAVVVCTLAGDVVETYWTNKTALPHTIIASTTSPRGEWIYAV
SDIGEMYCFSTETKKLESTVFNLHESSTLGVSHHPRRNLVATFSSIGELKTWKP
NT seq 1605 nt   +upstreamnt  +downstreamnt
atgtccgtcgcgggcgtcgaggacacgttagaggtcgacgccctggacgtggtgaagatc
gttctccagtgggctcgagagtctggtttggaaaacaccgcggaggcgttatcgagagag
acggcgacgacgctgaactgcgtggacgatttagaaacgtttcgtcacgacatcacgcga
gggcgatgggacgtcgtgctgccgagcttggcgaaattgtcaatgccgaagaatgttttg
gaggatgcgtacgaacacgtgacgctggagatgtgcgagctcggtgagcgagacaccgcg
cgggcgattttaaggcaatcgaacgtgatgaagacgatgcgagaggaacagagccgaaga
cacgcgcgtttggagcattacgtgagcgcgattgatttcaacgcgagcgacgcgtacggt
gggacgaccaaggagaagagacgggaaaagatagcagaggcgctatgtagagaggtgtgc
gtcgtgcctccgtccaggctcttggcgctcataggacaggcgttgaagtggcagcggagc
acaggggccctcccgcctgggacggcgttcgatttgttccgcgggcaagcgccggcggag
gacgaggaggaggagcagtgcccgacgacgtcgcacaagaggatcaagttttcgaaaaag
tccttcccggagtgcgcgtcgttcagtgcgtgtggtggaatgttagctactggatctgcg
gacgggttcatagaaatatgggacccgtacagcgggaagttgcgcaaggatctcaagtat
caggcggatgacgcgttgctcatgcatgacgacgccgtgctagcgatctcgttcagtaaa
gattccgaaatggtggcgtcgggttcgcaagacggtaaaatcaaggtgtggcgcgtgagc
acagggagctgtcttaggaagtttgagaaggcgcatcaggagggtgtcacgagcgtcgta
tttagcaaggatggctcgcaggtgctgagcggctcgttcgacggcttgatacgcgtacac
ggcctgaagagcggtaagttattgaaagagttcagaggtcatacgtcatatgtgaactct
gtcgcgttcacggaagatgaagctcacgttctctccgcatcgagcgatggctcggtgcga
gtgtgggacgccaagacgggcgagtgcaagcacacgttcagaccgccgccaccggtgaat
ccgaacaaagacgacgacgttgaggacacatatcaaacgggtacgatcccagccgttacg
tcggccgttccgaatccgaagaacgacgcccaaattatcgtgacgtcgaaaacgaacgcc
gtcgtcgtctgcacgctcgctggagacgtcgtcgagacgtattggacgaataagaccgct
ctgccgcacaccattatcgcctctaccacctctcccaggggcgagtggatttacgccgtg
agcgatatcggtgagatgtactgcttcagcaccgagaccaaaaagctcgagtcaaccgtc
ttcaacctccacgagagctccacgttgggcgtctcgcaccatccgcgacgcaacctggtc
gccacgtttagctcaataggcgagctcaagacgtggaaaccgtga

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