KEGG T01358: OT_ostta05g00460

Ostreococcus tauri: OT_ostta05g00460

Entry

OT_ostta05g00460  CDS       T01358

Name

(RefSeq) Domain of unknown function DUF3351

K12860

pre-mRNA-splicing factor CDC5/CEF1

Organism

ota Ostreococcus tauri

Pathway

ota03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:ota00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OT_ostta05g00460
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ota03041]
    OT_ostta05g00460
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta05g00460
Spliceosome [BR:ota03041]
Complex B
  Other components
   Prp19 complex
    OT_ostta05g00460
Complex C
   Prp19-CDC5 complex
    OT_ostta05g00460
DNA repair and recombination proteins [BR:ota03400]
Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    OT_ostta05g00460

SSDB

Motif

Pfam:

Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

OrcAE:

UniProt:

LinkDB

Position

5:complement(67540..69807)

AA seq 755 aa
MRIQIKGGVWKNTEDEILKAAVMKYGKNQWSRVSSLLNRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPVVGRTPSQCLERYEKLLDAACAKDEDYDAGDDPR
RLRPGEIDPNPETKPAKPDAVDMDEDEKEMLAEARARLANTKGKKAKRKAREKQLEEARR
LAELQKKRELKAAGIAHVRKAKRVRGVDYNAEIAFERKPDAVMYDTREEDEAFAKMQAAK
VFKPISLAELEGKKSAKEMDEANKKLAEARQKMQERRDMPGAVQQNLKANDASFTRRSKL
LLPTPQVSDRELEDIAKMGKGVSGLLDDGGTTPASALLSSYEQTPATSTARTPMRTPMVE
GDAILREAQQQAARRNQKSTLFGGGEEAAALMPTDFAGATPSRTRATPTPSRSEVSSQMG
TTPLLHGQTPIRDGLHINDQYAAHFTDLSERERRAHAASTSASLKGAFMSLPKPQNEYQV
DLPEAEEMEDELMEDAIVEDEADARARQAAALAEYEAMQMRKRSRAVQLDLPRPTEMVVV
EPLAGDAMSKLVNDEATDLLAHDVAKYSKNTRPAVSIEEFDESLMTNARELIEAEAQEML
REQNSSREDFADAFIAALVEERKKNIFVPSLNSNISVDEATEEQRLEAAKACFESLRRDM
EKDAKRASKLEQKCNLLTAGLQKRDGELRQKLKKTVDEIQSLAIEAESFAMLHEQEQRAA
PERIEYWLELVQAARAREKLLQEKYSQLTRELNAR

NT seq 2268 nt +upstreamnt +downstreamnt
atgcggatccaaatcaagggcggcgtgtggaaaaacaccgaggatgagatcctcaaggcg
gcggtgatgaagtacggaaagaaccagtggagccgcgtgagctcgctgttgaaccggaag
agcgcgaagcagtgcaaggcgcgatggtacgagtggctcgatccgagtatcaagaagacg
gagtggacgcgagaggaggatgagaaattgttacatctggcgaaactcatgccgacgcag
tggcgcacgatcgcgccggtggtcggacggacgccgagtcagtgcttggagcggtatgag
aagttgctcgacgcggcgtgcgcgaaggatgaggattacgacgccggggatgatccgcga
cgactgcgaccgggggaaatcgatcctaacccagagacgaagccggcgaaaccggacgcg
gtggatatggacgaggacgagaaggagatgctggccgaagcgcgagcgagattagcgaac
acgaagggtaagaaggcgaagcggaaggctcgggagaagcagctcgaggaggcgaggaga
ttggcggagttgcagaagaagcgagagctcaaggcggcgggcatcgcgcacgtgcggaag
gcgaagcgcgtgcgcggggtcgattacaacgccgagatcgcgttcgagcgaaaaccggac
gcggtgatgtacgacacaagagaagaagacgaagctttcgccaagatgcaagctgcaaaa
gtgtttaagccaatctccctcgctgagctcgagggcaaaaagtcagccaaggagatggat
gaggcaaacaaaaagctcgccgaggcgagacaaaagatgcaagagcgtcgggacatgcca
ggcgcggttcagcaaaatcttaaggcgaacgatgcgtctttcacgcgacgatcaaagttg
cttctaccgacgccgcaagtctccgacagagagttagaggacatcgcaaagatgggcaag
ggtgtgagtggattactcgatgacggcggtacgacgccggcctccgctcttttaagctca
tatgagcagactccggcgacttcgacggcgcgcactcccatgcgcactcccatggttgag
ggagacgccatcttgcgagaggcgcagcagcaagcggcccgccgcaaccaaaagtccaca
ctctttggcggtggtgaagaggcggcggcgctaatgcccaccgatttcgcgggagcgacg
cccagtcgcactagggcgacgccgacgccgtctcgaagcgaagtgagttcgcaaatgggc
acgacgccattgctgcacggacaaacgcctattcgtgacgggttgcacatcaacgatcag
tacgccgcgcacttcaccgatttgtcagagcgcgaacgtcgcgcccacgccgcgtccacg
agtgcgtctctgaagggtgcgttcatgtcccttccgaagccacagaatgagtatcaagtc
gatttacctgaggcggaggagatggaggacgaacttatggaggacgccattgttgaagac
gaagcagatgcgcgcgcgcgtcaggccgcggcgctggcagaatacgaagctatgcaaatg
cgcaagcggtcgcgtgctgttcaactcgatcttcctcggccgaccgaaatggtagtcgtc
gagccgctcgccggggacgccatgtccaaactggtgaacgacgaagcgacggacttgctc
gctcacgatgtcgccaaatacagtaagaatacgagaccagcggtgagtattgaagagttt
gatgagtcattaatgacgaacgcccgtgaactcattgaggccgaagcgcaggaaatgctt
cgcgaacagaatagttctcgcgaagacttcgcggacgccttcatcgcggcgctcgttgaa
gaacgcaagaaaaacatcttcgtccctagcctcaattcgaatatttccgtcgatgaagcc
acagaagaacagcgccttgaagccgccaaggcgtgcttcgaaagcctgcgaagggatatg
gagaaggacgccaaacgcgcctccaagttggagcaaaagtgtaatctgctcactgcgggt
cttcagaagcgcgacggcgagctgcgccaaaagctcaaaaagactgtggatgaaatccag
tcactcgcgatagaagccgagtctttcgcaatgttacacgagcaagagcaacgcgccgct
ccggaacgaattgaatactggctcgagttggtgcaagcggctcgcgcgagagagaaactt
ctccaagagaagtactcgcagttgacgagagagctgaacgcgcgttag

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