Ostreococcus tauri: OT_ostta05g03760
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Entry
OT_ostta05g03760 CDS
T01358
Name
(RefSeq) Helicase, C-terminal
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta05g03760
Enzymes [BR:
ota01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OT_ostta05g03760
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
90S particles
Helicases
OT_ostta05g03760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
AAA_19
AAA_23
nSTAND3
ATPase
Motif
Other DBs
NCBI-GeneID:
9834452
NCBI-ProteinID:
XP_022839068
OrcAE:
OT_ostta05g03760
UniProt:
A0A090M5Y7
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All DBs
Position
5:620064..623759
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AA seq
1231 aa
AA seq
DB search
MPLDEREGEARELTFLPTKKGTSGRAGERAVRERERRREAEERAKSTTKLSSSQRRKMKK
LAEEERKRDERASVMATLEANKVDERALGLMRATTSLGTKETAKEKMRRALKAERAGVEL
EDLRDARLTKRPKVEAESESEEESDDNLESESERQMERVGERRGARMVDKDASDDSEAED
DALTQAAVRTAVAAGMASLDDATRELVKTLRARTGMSDEGDAPKSNAYRGAHHEVFQGCS
FVVPVNRTDKINSTREGLPIVQEEHEIVDAINTNPVTVICGATGCGKTTQVPQFLYEAGY
GDPECASHPGAVAVTQPRRVAVTSTARRVAEELNVPLGGDVGYQVRYDKNVGENPRIKFM
TDGILLREVQLDFLLRKYSVVIIDEAHERSVNTDILLGLLSRIVPLRAALAAEGKAVTPL
RLVVMSATLRVEEFVGNKKLCPTPPALLQVATRQFPVTVHFSRRTETADYVGTAVKKVLA
IHRKLPPGGILVFLTGQREVELMCRKLREAYPLDGKPKIVEDEETSEKDDEKDDDMVDAY
DVDAIDAGGEDVSGEDEVDFEGDDDFSDVDSDISEEDEVLIMGGEGVGEEEAAEAEAAWT
RANAPSAALRAAGGGGEVDGPGGLNVLPLYALLPAHLQQRVFAPTPDGSRMVIVATNVAE
TSLTIPGIRYVVDAGRAKERVYERDASLSRFRVGWVSKASADQRAGRAGRTSPGHCYRLF
SSAHFVDEMKAHADPQILGVPIEGVVLQMRAMGIDKVVNFPFISPPEKAALAAAERTLTI
LGAVDKRRGMEEIGPLTDLGRAMAVLPISPRHSRMLFAAAQSGVSGCLSPAIAIAAALSL
DSPFLRQSSEETAGEDGVNANKGPPPHVKFHHPASDALSAAQALLAYDSCNGPKATESFC
STNRLHEKTMREMSDLRRQLKRLIVNLARDVSTKLSTGDTRSMFTEGVLQELEFDAAAPK
MLPPGGDVERALRQALCAGWADRIARRSKHKEMEQASRSNENVTKATRYVPALLDAAVFL
HPTSSLHRSSPDYVVYTDLLQTDKRAYIVGATSIEPEWLIKHCSALVDEGVLLSDPAPRY
NSREDRVIGWTAPRFGPHRWDLPLNPVDVPSIDTRCAVFATALLSGTVSEPMGELRDKLA
AKPLLASRPEGKTQARVIDLLGALKRGGICTRAGLQQVWAKNPKFLYPELKAWLRQGKAY
ALESIWSKLVRYVVEYDPATAANKKKKRHSK
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcgacgagcgcgagggcgaggcacgagagctcacgtttttaccgacaaagaag
ggcacgagcggtcgcgcgggtgagcgagcggtgagggagcgcgagcgtcggcgtgaggct
gaagaacgagcgaaatcgacgaccaaactgagttcgtcccagagacgaaagatgaaaaaa
ctcgccgaggaggagcgtaagcgcgatgaacgggcgagcgtgatggcgacgctggaggca
aataaggtggacgaacgtgcgttggggttgatgcgagcgacgacgtcgttggggacgaaa
gagacggcgaaggagaagatgagaagagcgctcaaggcggaacgcgcgggcgtcgagttg
gaggatttacgagacgctcgattgacgaagagaccgaaggtggaggcggagagtgagagc
gaggaggagagtgatgataacctggagagcgagagcgagcgacagatggaacgggtcggg
gagcggcgtggtgcgcgcatggtcgacaaggatgcgagcgacgattcagaggcagaggac
gacgcattgacgcaagctgcagtacgaacggcggtggcagcgggcatggcgtcactggac
gacgcgactcgggagttagttaaaactctacgcgcgaggacggggatgtcggacgaggga
gacgcgcccaaatccaacgcatacagaggagcgcatcacgaagttttccaaggatgttca
tttgtggtcccggtgaacaggacggataagatcaatagcacgcgcgagggactgccgatc
gtgcaagaggagcatgaaatcgtggatgctatcaacacgaaccccgtcacggtgatctgc
ggcgccaccggctgtggtaagacgacccaggtgcctcaatttttgtacgaggcagggtac
ggcgatcccgagtgtgcgagtcatccgggagctgtggcggtgactcaacctcgacgggtg
gcagtcacgtccacagcccgtcgtgttgcggaggaactgaacgtaccactaggcggagat
gtcggttatcaggtccgttatgacaaaaacgtgggcgaaaacccgagaataaagtttatg
acggacggtatcctcttgcgagaggtacagcttgatttcctgttgcgaaagtactccgtc
gtgattatcgacgaggcacacgagcggagcgtaaacaccgacatcttgctcggactgctt
tcaagaatcgttccgcttcgcgcggcactggcggccgagggtaaggccgtgacgccgcta
cgtttggttgtcatgtcggcgactcttcgagtcgaggagtttgtggggaacaaaaagtta
tgtccaacgccaccggcattgctccaggtcgccactcgtcagtttcccgtcactgtgcac
ttctcacgtcgaacggagactgctgactacgtcggtacggcggtgaagaaggtcctcgca
attcatcgtaaacttcctcccggtggcattcttgtctttttaacgggtcaacgagaagtc
gagctcatgtgccgcaagctccgagaggcttatcctcttgacggaaagcccaagatcgtt
gaagacgaggaaacaagtgagaaggatgacgagaaggatgacgacatggtggacgcatac
gacgtcgacgcgatcgatgcaggtggagaggacgtgagcggagaggacgaggtcgatttc
gaaggcgatgacgacttttcagatgtcgacagtgacatcagcgaggaggacgaagtgctg
atcatgggaggcgaaggcgtcggggaagaggaagcggccgaagctgaagcggcgtggacc
cgtgcgaatgcgccttctgcggcactacgtgcggccggtggtggtggagaagtggatggg
ccgggtggtctgaacgtcctcccgctctacgcacttcttccagctcacctgcagcagcgc
gtattcgcgcctactccggacgggtcgagaatggtcatcgtcgctacgaacgttgcggaa
acatcgctcactattcctggaatcagatacgtcgtggacgccggtagagccaaggagcgg
gtctatgaacgtgacgccagtttgtctcgctttagagtagggtgggtgagcaaggcgagt
gcagaccaacgcgctggccgggctggacgtacgagtccggggcactgctaccgacttttc
agtagtgcccactttgtggatgaaatgaaagctcatgcggatccgcagatcctcggagtc
cccatcgagggagttgtgctacaaatgcgcgcaatgggcatcgacaaggtggtgaacttc
cccttcatctcgccgccggagaaagctgcgctggcggcggcggagagaactttgacaata
cttggagccgttgataaaaggcggggaatggaggagatcggtcccttgacggacctgggg
cgcgccatggcggtgctgccgatcagcccacgacactctcgaatgttgttcgctgctgcg
cagagcggagtgagtggatgtttgtcgccagcgatcgcaattgcggcggcgttgagcttg
gacagtccgtttctacgacagtcatccgaagaaaccgcgggtgaggatggcgtgaacgcg
aacaaaggcccgcctccgcacgtcaagtttcatcatccggcgagcgatgccctgtccgcg
gctcaagctcttttagcgtacgactcgtgcaacggaccgaaagcgacagaatcattctgc
tctacaaacaggcttcatgaaaaaactatgcgtgagatgagtgatctgaggcggcaactt
aagcgattgatcgtcaacctcgcgagggatgtgtccacgaagctctcgactggcgatacc
aggtcaatgttcacggaaggtgtccttcaagagttagagttcgacgcagcggctccgaaa
atgctccctcccggaggtgatgttgagagagctctaagacaagccctctgtgccggttgg
gcggacagaatcgcgcgtcggtcgaaacacaaggagatggagcaagcgtctcgttcaaat
gaaaacgttacaaaggcgacacgttatgttccggcgctcctcgacgcagcagtctttctg
catccgacttcttcgctccaccgctcttcgccggactatgtcgtctacacagatttactt
caaactgataagcgggcttacatcgtcggcgctactagcatcgagccagagtggttgata
aaacactgctctgctctcgtggacgaaggcgtgctgttgagcgatccggcgccgaggtac
aactctcgggaggatcgtgtcatcggttggaccgctccgagatttggtccgcatcgttgg
gatctgccactgaatccggtcgacgttccttcgatcgacacgagatgtgctgtgtttgcc
accgctttgctttccgggacggtttctgaaccgatgggggagctgcgtgacaagctcgcc
gctaagccccttttggcgtctagacctgaaggcaaaacccaggctcgggtcatcgactta
ctcggagcgttgaaacgcggaggaatatgcacgagagcgggacttcagcaggtctgggct
aagaacccaaagtttctttaccctgagctgaaggcctggctgcgccaaggcaaggcatac
gctctcgaatctatttggagcaaactcgtgcgctacgtcgtggaatacgaccctgcgacc
gctgcaaacaagaaaaagaagaggcattcgaaatga
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