Ostreococcus tauri: OT_ostta05g04080
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Entry
OT_ostta05g04080 CDS
T01358
Name
(RefSeq) Helicase, C-terminal
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ota03041
]
OT_ostta05g04080
Enzymes [BR:
ota01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OT_ostta05g04080
Spliceosome [BR:
ota03041
]
Complex C
Other components
Complex C specific factors
OT_ostta05g04080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_30
AAA_22
Cas3-like_C_2
AAA_19
EACC1
AAA_25
AAA_16
Motif
Other DBs
NCBI-GeneID:
9834486
NCBI-ProteinID:
XP_003079512
OrcAE:
OT_ostta05g04080
UniProt:
Q018K5
LinkDB
All DBs
Position
5:669712..671871
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AA seq
719 aa
AA seq
DB search
MSGFWRPGAEAPSINRPSTLLSLEVDADDDANRGSAVGVGIINFEKNPKQSLSARRRALP
IAAHENELLYCVERHATTIVVGHTGCGKTTQIPQYLRAGGWCASGRGVAVTQPRRVAAQT
VAQRVAEEVGCVLGDVVGYAIRFEDVCAEGKTEIKFCTDGALLRELADDPLLTKYSVVMV
DEAHERTLATDVLLGLLKKVQRARPDLRLIVSSATIQAELFAEFFDASRADAADARGADA
GPSKKPVIMSVEGRAHGVLIHYADEPTGDYVQRAVDAALDVHQGEGPGDILIFLTGEEEI
DDAVRLLEDEAREMQSRSGNSRNALDLVVCPLYAGLNPAAQLEAFRPARRGTRKVVVATN
VAETSVTIEGIVYVIDCCFSKQKAFDPERGMESLFVAPVSKASANQRAGRAGRVRPGKCF
RLCTEIDYRALADVTAPEIVRSDLASVVLQIKAMGIDNIMNFEWVSPPPEANMIKALELL
YALKALDDDAKLTNPLGIHLAELPVDPQLGKMLLVSGEMECVREALTVAAYQQVRSLWVT
HRGQKKRLDEMRNRFAVEEGDAVMMLNIHDAYRDARNQAKFAGENMLNHRALLRAGDIRA
QLRRHLARLGVLTDSSCGDDTIPIRRAIAAGFFANAAALAPYGGGADGSVFHSLRATTAR
ARARELRVHPSSALFHARPPCVVYCAAVRTDREYMRDVTVVDPSWLTELAPHFYEARVT
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcttctggcgtcccggcgccgaagctccgagcatcaatcgtccatcgacgctc
ctatccctggaggtcgacgcagatgacgatgcgaacagaggcagcgcggtgggcgttgga
atcatcaattttgagaaaaatcccaagcaaagcctcagcgcgcgacgccgagcgctcccg
atcgccgcgcacgagaacgagttgttatactgcgtcgaacgtcacgcgacgacgatcgtg
gtcgggcacaccgggtgcgggaagacgacgcagataccgcagtatttgagagcgggcggg
tggtgcgcgagcggacgcggcgtggcggtgacgcaaccgaggcgagtggcggcgcagaca
gtggcgcagagggtggcggaggaggtcgggtgcgtgttaggggacgtcgtggggtacgcg
attcggttcgaggacgtgtgcgcggagggaaagacggagattaagttttgcacggatggc
gcgctgttgagagagttggcggacgatccgttattgacaaagtattcggtggtgatggtg
gacgaggcgcacgagcgcacgctcgccacggacgtgttgttggggttattgaaaaaggtc
cagcgtgcgcgaccggatctacggttgatcgtgtcgagcgcgacgattcaggcggagttg
tttgcggaattttttgacgcgagcagagccgacgccgccgatgcgcgcggcgccgacgcg
ggaccgtccaagaagcccgtgatcatgtccgtcgagggtcgggcgcacggcgtactgatt
cattacgccgatgaaccgactggggattacgtgcagagggcggtggatgcggcgctggac
gtgcaccaaggcgaaggtccgggtgacattttaatctttctcacgggagaggaagagatc
gacgatgcggtgcgtttgctcgaggacgaggcgcgagagatgcaaagtcgttcagggaat
tcgcgtaacgcgctagatttagtcgtttgcccgctctacgcgggattgaatccagccgct
caattggaggcgtttaggccggcgaggagaggaactcgaaaagttgtcgtcgccacaaac
gtggcggagacgtccgtcacgatcgagggcatcgtgtacgtgatagattgctgcttctct
aagcagaaagcgttcgatcccgaacgcgggatggagagtttgttcgtcgctccggtgagc
aaggcgagcgcgaaccagcgcgccggaagagccgggcgcgttcgcccgggtaagtgcttt
cgcctgtgcaccgagatcgactatcgagcgttggccgacgtcacggcgccagagatcgtt
cgaagtgatctagcgagcgtggtcctgcaaatcaaagccatggggatagataatattatg
aatttcgagtgggtgtcgccgccgcccgaggcgaacatgatcaaggcgctcgagctcctg
tatgcgctcaaggctctggacgacgacgccaagctcacgaacccgctcgggattcatcta
gccgaattacccgtcgatccccagctcgggaagatgctcctcgtgagcggagagatggag
tgcgttcgagaggcgctcacggttgcggcgtaccagcaagtgcgctcgctttgggtcacg
caccgcgggcagaagaaacgactggacgaaatgcgcaatcgtttcgccgtggaggaaggg
gacgcggtgatgatgctgaacattcacgacgcgtaccgcgacgcgcgaaatcaagccaag
tttgcgggcgaaaacatgctcaatcaccgagcgcttcttcgcgccggagacattcgcgcg
cagttgagacggcacctcgcgcggctcggcgttctcaccgattcgtcgtgcggagacgac
acgattccgattcgtcgcgccatcgcggctggtttcttcgccaacgccgccgcgctggca
ccgtacggaggcggtgccgacggttccgtcttccactctcttcgcgcgacgacggcgcgc
gctcgggcgcgcgagctccgcgtccacccgagctccgccctcttccacgcccgtccaccg
tgcgtggtgtactgcgccgccgtgcgcaccgatcgcgagtacatgcgcgacgtcaccgtc
gtcgacccatcctggctcaccgagctcgccccgcacttttacgaggcgagggttacgtag
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