Ostreococcus tauri: OT_ostta06g00310
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Entry
OT_ostta06g00310 CDS
T01358
Name
(RefSeq) NOT2/NOT3/NOT5
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ota
Ostreococcus tauri
Pathway
ota03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OT_ostta06g00310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta06g00310
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
OT_ostta06g00310
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
OT_ostta06g00310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
9835422
NCBI-ProteinID:
XP_003079650
OrcAE:
OT_ostta06g00310
UniProt:
A0A090N3J1
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Position
6:50813..52405
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AA seq
530 aa
AA seq
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MQSNGYGAQGNAPPPGPYGQQGGLPGMNYGGVPRPGGQFAQQRPMANPPGMQGAPAMPRA
VMGGAARQGSLPLPYGGVPGQPPGMMSNANAGAQGTMAQGGMSSGMGAAQRGVMLDRSQS
QPVGLGQGGVPANLQRASSGLPMPSAGVGMTAPRTVGMMSSGPVPRAYPTIGSQGDMNSL
PKMQGAGGLELGSSAGMGGGLGGFNQDQKAPGFDDSEFPTLGGGGGGGMPQRVASFGNGY
GMPGEGHESVYDFGKPQRDFSMEKEDFPALGGKGPGNMGGLVPPQSLDSKDGAGVSYPPL
ARQSSGGVGFGTQAPGRQGGAPGGFQFEGGAPPPPVKSSASPTGPSGTLQKDRYGLLGLL
PVIRMVNPNVSTLALGADLTMLGLNLNSPDSLCKSFTLPWNDSAPNNDLELTIPSAYSQQ
VCRCHPAVFAKFQQETLFYIFYSMPGEESQLFAADELVQRGWGFHKELKAWLMRVANTEA
ANQTEQGERGSFWVFDPIAWDRVRKDNFTLQYDQLETRPTVPARVETGLR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcaacggatacggggcgcagggaaacgcgccgccgccggggccgtacggacag
cagggcgggctgccggggatgaactacggtggggtcccgcgtcccggagggcagttcgcg
cagcagcgtccgatggcgaacccaccggggatgcagggggcaccagccatgcccagggcg
gtcatgggcggcgcggcgcgacaaggttcgctgccgctgccgtacggaggcgtgccgggc
caaccgccgggaatgatgagtaacgcgaacgcgggggcgcaaggaacgatggcccagggc
ggcatgagctcgggcatgggcgcggcgcagcgtggggtgatgttggacagatcgcaaagt
cagccggtgggcttagggcaaggcggcgtcccggcaaaccttcaacgcgcgtccagcgga
ttgccaatgccgagcgcaggggtgggaatgaccgcacctagaacggttggtatgatgagc
tctggacctgtaccgcgagcgtatcctacgatcggcagccaaggcgatatgaacagtttg
ccgaagatgcaaggtgcgggcggtctggagttgggttcttccgcgggcatgggtggcggt
ttgggtgggttcaaccaggatcaaaaggcgccagggtttgatgactcggagtttccgacg
cttggtggtggtggtggtggtggtatgcctcagcgcgtggcctcgttcgggaatggatac
ggaatgccgggtgaaggacacgagagcgtgtatgattttggcaagcctcagcgggacttt
agcatggagaaggaggacttccccgccttgggtgggaaagggcccggtaacatgggtgga
ctcgtccctccgcagagcttggactcaaaggacggtgccggggtctcttatcctcctttg
gcgcgtcagagctcgggcggcgttggtttcggcacgcaagctccggggcgtcaaggtggc
gctcccggcgggtttcagttcgaaggaggcgcgccaccgcctcctgtgaagtccagtgct
agtccgactggaccgagcggaacgttgcagaaggatcggtacggcttgcttggtttgctg
ccggtgattcgaatggtgaatccaaacgtgtccacacttgccctcggtgcagacctcacc
atgctcggcctgaacctgaactctcccgacagcttgtgcaagtcgtttacgttaccgtgg
aatgattcggcgccaaacaacgacttggaactcacgattccgtctgcgtactcgcagcaa
gtgtgccgttgtcatccggcggtgtttgcgaagttccagcaggaaacgctgttttacatc
ttctacagtatgcccggagaagagtctcagttattcgctgcggacgagctagtgcaacgc
ggttgggggttccataaggaactcaaggcttggctgatgcgcgtggcgaacactgaagcg
gcgaaccaaacagagcagggcgagcgaggatccttctgggtgttcgatcccatcgcttgg
gaccgagttcggaaggataacttcacccttcagtacgatcagttagagacgcgtccgacg
gttcccgcgcgcgtcgaaacgggtttgcgttga
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