Ostreococcus tauri: OT_ostta06g01930
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Entry
OT_ostta06g01930 CDS
T01358
Name
(RefSeq) Exonuclease, RNase T/DNA polymerase III
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ota
Ostreococcus tauri
Pathway
ota03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OT_ostta06g01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta06g01930
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
Pre-60S particles
RNases
OT_ostta06g01930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
9833384
NCBI-ProteinID:
XP_003079823
OrcAE:
OT_ostta06g01930
UniProt:
A0A090M863
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Position
6:complement(<317598..>319346)
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AA seq
582 aa
AA seq
DB search
MASLKRERATSVEAAPEAAPEALERRVDDDERRIKANADRAAIYGEDARAEVQLRLECAN
SFKLAHAHELALWTLLPETANECVNPRWAFVRNKPLIERVVIIMAPGMDHKMWCEDGAST
CPRLKRALGDGLRTMCDSPTAVGMTLCKSLMYSVHGKQGLDGNGGRKKFKASTHAKDLCK
RKFAYKPSHFVLTPGDMSDMVYPLPKLTDDGKLEMEEGFVATQPAGEGIARGSGYHPFLA
LDCEFCYTAEGLQLTRVSVVKEDGDVVYDKLVKPPTEITNYNTAHSGITAEQMEGVTTTL
QDVQRELLEMIPCETILIGHSLENDLHRLKIIHANVIDTCALYPHKRGAPYRNALRYLTE
QYLGRKIQEGSHDSVADAQATMELALLKFINGPSFGEVSTEGGGVFDVLSTHKIECVMID
SPALCRRLPAGSARVVEAQDDAEVKKAILDQMNRRASAGKMAVFGHLHDYTKVLSAEAQR
AHAREQEPSDSERVIADKTRRQALERMDAVVGEIWEGLPPNTLLLFTSGVGDAHTLRLAQ
EQKWKRHQSIGGWGAWTDEAEHDLRRLYDRTKHAVTLAAVKQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttgaaacgcgagcgtgcgacgagcgtcgaggcggcgcccgaggcggcgccc
gaggcgctcgagcgtcgcgtcgatgacgacgagcgaaggatcaaggcgaacgccgatcga
gcggcgatttacggcgaggacgcgcgcgcggaggtacagctgcggttggagtgcgcgaat
agttttaagctcgcgcacgcgcacgagctcgcgctctggaccttgcttccggagacggcg
aacgagtgcgtgaacccgcgatgggcgttcgtgcggaataagcctttaattgagcgagtg
gtgataatcatggcgcccgggatggatcataagatgtggtgcgaggacggcgcaagcacg
tgtccgcggttaaagcgggcgctcggcgacgggctgaggacaatgtgcgacagcccgaca
gcggtggggatgacgctgtgtaagtcgttgatgtattctgtacatgggaagcagggctta
gatgggaacggggggcggaagaagttcaaggcgagcacgcacgcgaaggatttgtgcaaa
cgaaaatttgcatacaagccgtcgcactttgtgctcactcctggtgacatgagtgatatg
gtatatccgctaccaaagttgacggatgatggtaagttagagatggaagaaggattcgta
gcgacgcaacccgcgggggaggggatcgctcgagggagcgggtatcatccgttcttggcg
ctcgactgtgaattttgttacaccgcggaaggcttgcagctcacgcgagtttccgtcgtg
aaagaggacggagacgtcgtttacgataagctcgtgaaaccacctactgagattacgaac
tacaacacggcacatagcggtatcacggccgagcagatggagggagtaacgacaacgcta
caagatgtccagcgcgagcttctcgagatgattccatgcgaaacaattttgatcggtcac
tcgctggagaacgacttgcatcgcttaaaaatcatccatgcgaacgttatagacacgtgt
gcgctatatccgcacaaacgaggcgcgccctatcgaaatgctctcagatatctcacggaa
cagtatcttggaaggaaaattcaggaaggatctcacgactccgtcgcagacgcgcaagcg
acaatggagctcgctcttcttaagtttatcaacggtccgtcgtttggagaagtttcgacg
gaaggaggtggcgtgttcgacgtgctttcgacgcataagatcgagtgtgtgatgattgac
tcgcccgcgctgtgtcgtcgtctgccggctggtagcgcacgtgtggttgaggcacaagac
gacgcggaggttaagaaagcgatcttagatcaaatgaataggcgtgcatctgcaggcaag
atggccgtattcggtcatcttcacgactacaccaaggtgctctccgcggaggcgcagaga
gctcacgcgcgagagcaagaaccgagcgatagcgagcgcgtcattgccgataaaacgcgt
cgacaagcgctcgaacgcatggacgcagtcgtcggcgagatatgggaaggcttgcccccg
aacacgcttttactcttcacatcaggcgtgggcgacgcccacaccctgcgactggcccag
gagcaaaagtggaagcgccaccagagcattggtggctggggcgcgtggaccgacgaagcc
gagcacgatctccgtcgcctgtacgatcgaacaaagcacgccgtgacgctcgccgcggta
aagcaatag
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