Ostreococcus tauri: OT_ostta06g02640
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Entry
OT_ostta06g02640 CDS
T01358
Name
(RefSeq) DNA mismatch repair protein MutS-homologue MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ota
Ostreococcus tauri
Pathway
ota03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OT_ostta06g02640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta06g02640
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
OT_ostta06g02640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
9835400
NCBI-ProteinID:
XP_022839237
OrcAE:
OT_ostta06g02640
UniProt:
A0A090N3M7
LinkDB
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Position
6:complement(<438556..>442191)
Genome browser
AA seq
1211 aa
AA seq
DB search
MGENKDANAPRTVVESAKASDSIAVEVPMIDASTTSDEKENAGGNAANGKDSSTKRNSTS
APTPTPPEREPDVDDGTRNGRRRVRATKKANVLAESSDSDFDATAEVDEEEEDDDEFDAD
ESESESESEDDDFSESESPVKKTKKPVKKASAATKASAPVTKTNGRNKTTVNTTSVAAKS
SEPKDLSAAEVLGGVGPEQYAARERLKFTFLQPENIKDAKGRRPSDPDYDPSSLLLPSTF
PKLRDANGQPWTVSPGQAQWWRFKAANFDSVLLFKMGKFYEMFEMDAHIGVRDLGLMYMR
GDQPHAGFPEKNYAMHAEQLARKGHRVVCIEQTETPDQLAERKRKDKTCKDTVVRREMVQ
VLTKGTMVDTGMLNSSPDAAYVCSIVDGGVEDDGDGWVGLCAADCGTGRFLVGAWRDDEG
ASCLRTALAELRPVEILVPPSGMSTRTNGAVLEMCSSAQQRTFKTTSAADAIQDVETEGY
FKNLKSGLPAAIKELRDTACDPARECGISAWGTIVAYLRAALIDADLVPQGRIESLHTTE
ADTREQLARWAHSSHVAMDAAALSGLEVLENTAGGSAGTLLASLDRCASGPGRRLLRRWV
CRPLMSPSAIKARQIAIAAMRGSGLEVTGIARKLLREAPDTERAISRVVGSSGGRGRDAA
HVVLYEDMARAKLNDFLAALEGVRAVRDAVNAIASCDDACKKSSVLRALCVAGDEAATHE
DVFTATGGVAIPDLSELKDMEAAFDWNAAKTNGRIEPARGIDADLDAAEDKLAAADAQLA
AWLEEARVQLGGHKTEVCFVNANKDTHLVEVPDRLAAKVPHNWVREGKRKGFERFTCGEL
EPLRAKRATAQEAREEALSGVFRRVVAKFCENAGKWQAAASVGAVIDVLSSLAVASDEMY
ASCSAVCTPKVHPAPAQSESATLVSKNLSHPCALSLARSFVPNDARLGGEHPGFCLITGP
NMGGKSTYIRQVCLAAIMAHVGADVPASKFEMTAMDAVFVRMGAKDNLAGGQSTFMVELS
ETAAMLRRATTNSLVALDELGRGTATADGTAIACAVASHLIERRCRTLFSTHYHRLADDH
ARDPNVALAHMACRVETPSDAGADAYGRETVTFLYTLASGNCPRSYGVNVARLAGLPESV
CLAAARRASRLEAGQLEKLVGDASSRARATTACADVLRDCTLDDLSIDAVRAAQLKARDA
IAYATHDDPPM
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaacaaagatgcgaacgcgcctcgaacggtcgtcgagagtgcgaaggcgtcg
gattcgatcgcagtagaggtgccgatgattgacgcgtcgacgacgagcgatgagaaggag
aacgcgggcggcaacgcggcgaatgggaaggattcgtcgacgaagaggaactcgacttcg
gcgccgacgccgacgccgccggagcgtgagccagatgtcgatgatgggaccagaaacggg
cgaagacgggtgcgggcgacgaagaaggcgaatgtgttggcagagtcaagtgatagcgat
ttcgacgcaaccgcggaggtcgatgaggaggaggaggacgatgacgagttcgacgcggat
gagagcgagagcgagagcgagagtgaagacgatgatttctccgagagtgagtcgccggtg
aagaagacgaagaagccggtgaagaaggcctccgcggcgacgaaggcttctgcgccggtg
acgaagacgaatggtcgtaataagacgaccgtgaacacgacttctgtcgcggcgaaatca
tccgaaccaaaggatttgagcgccgctgaggtgctcggaggggttggaccggaacagtac
gcggccagagaacgcttgaagtttacgttccttcagccggagaacatcaaggacgccaag
ggtcgacgtccgagcgatccggattacgatccgtcctcgctcttgttgccgtcaactttc
ccaaagttgcgcgacgcaaacgggcagccatggacggtttcacctggtcaggctcagtgg
tggcgattcaaggccgcgaactttgactcggttttgcttttcaaaatgggcaagttttac
gaaatgtttgagatggacgcgcacataggcgtgcgagacttgggtttgatgtacatgagg
ggagaccaaccgcacgctggatttccagagaagaattacgccatgcacgccgagcagctc
gctcgcaaggggcatcgcgtggtttgtattgaacagaccgagaccccggatcaattggca
gagcgtaagagaaaggataagacgtgcaaggatacggtggtgcgacgcgaaatggttcaa
gtgttgacgaagggcacgatggtcgatacgggcatgttaaattcttctccggacgccgcg
tacgtgtgttcgatcgtagacggtggtgtggaggacgatggagatggatgggtcggttta
tgcgctgcggactgcggtacgggtcgatttcttgtgggcgcgtggcgcgatgatgaagga
gcaagttgtttgcgaaccgcgcttgccgagcttcgaccggtcgaaattctggtgccaccg
tcgggtatgagcactcggacgaatggtgcggtattagaaatgtgttcgagcgcgcagcaa
cgtacgttcaagacgacgagcgctgctgatgcgatccaagatgtggagacagagggctat
ttcaaaaatctcaagagcggtttgccagcggcaatcaaggagttgcgcgacaccgcgtgc
gatcccgctcgcgagtgcggaatatccgcttggggcactattgtggcgtacttaagagcg
gcgttgatcgacgctgacttggtaccgcaagggcgaatcgaatcactccacacaacagag
gcggatactcgggagcagttggcgcgctgggcgcattcttcacacgttgccatggatgcc
gccgcgctctccggtctcgaagtgttagagaatactgcaggaggatccgctgggacgttg
ttggcatcgcttgatcgatgcgcgagtgggcctggacgtcgattgttgcgccgctgggtg
tgcagaccgttgatgagcccatccgccatcaaggctcgtcagatagcaatcgcagctatg
cgagggagtggcttagaagtcacgggtatcgctcgtaaacttttgcgcgaggcaccagat
accgagcgcgcgatatctcgtgtggtcggttcgagtggtggacgaggtagagatgcggcg
cacgtcgttttgtacgaggacatggcgcgtgcaaaattgaacgatttcctcgcagcgctg
gagggtgtgcgcgctgtgcgcgatgccgtaaacgccatcgcctcgtgtgatgacgcgtgc
aagaaatcaagcgttcttcgtgcactatgcgtcgccggtgacgaggcagcgacgcacgag
gatgtcttcacagctactggaggcgtggcgattccggatttaagcgagctcaaagatatg
gaggctgctttcgattggaacgctgcgaagacgaatgggcggatcgaaccagcgcgtggc
atcgacgctgatttggacgccgccgaagataagctcgccgcggcggacgctcaactagcg
gcctggttggaggaagcacgcgtccagctcggaggacacaagacagaggtgtgctttgtg
aacgcaaacaaagacacgcacctcgtcgaggttccggatcggttagctgcaaaagtcccg
cacaactgggtgcgagagggtaagcgtaagggtttcgagcgattcacgtgtggagaactc
gaacctcttcgcgcgaagcgcgcgacggcacaggaggcgcgtgaggaagcgctgtccggt
gtatttcgtcgcgtcgtcgccaagttttgcgagaacgccgggaagtggcaagccgctgcg
agcgtgggtgcagtcatcgacgttttatcttccttggccgtcgccagtgacgagatgtac
gcgtcttgcagcgccgtgtgcacgcccaaggtgcatccagcgcctgcgcaaagcgaatcg
gccacgctcgtgtccaaaaacctctctcatccctgtgccctgtcgttggcgcgttcgttc
gtcccgaacgacgctcggctgggaggggaacaccctgggttttgcctaatcaccggtccg
aacatgggtggaaagtcgacgtacattaggcaggtgtgtttggctgccatcatggctcac
gtcggcgcggatgtgccagcttctaaattcgagatgaccgccatggatgcggtcttcgtg
agaatgggtgcgaaggataacctcgccggcggtcagtcgacgttcatggtggaactcagc
gaaacggcggcgatgttgcgtcgagcgacgacgaactcgctcgtcgcgttggacgaactc
ggacgcgggacggcgaccgcggatggcaccgccatagcttgcgccgtcgcttcgcacctc
atcgagaggcgatgtcgcacgcttttcagcacgcactatcaccgcttggcagatgaccac
gcgcgtgatccaaacgtcgccctcgcgcacatggcgtgccgcgtggagacgccgagcgac
gcgggcgcggacgcgtacgggcgcgaaaccgtcaccttcctctatacgctcgcgagcgga
aactgtccgcgaagctacggcgtgaacgtcgctcgcttagcgggacttcccgagtccgtc
tgtctcgccgccgctcgaagggcttcgcgtctcgaggctgggcaattagaaaaactcgtg
ggcgacgcctcgagccgagcgcgggcgacgacggcgtgcgcggacgtccttcgagactgc
accctcgacgacctctccatcgacgccgtgcgcgcggcacagctcaaggcgcgcgacgcc
atcgcgtacgcgacgcacgatgacccaccgatgtga
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