Ostreococcus tauri: OT_ostta06g03990
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Entry
OT_ostta06g03990 CDS
T01358
Name
(RefSeq) DNA mismatch repair protein Pms1/Mlh2
KO
K10858
DNA mismatch repair protein PMS2
Organism
ota
Ostreococcus tauri
Pathway
ota03430
Mismatch repair
ota03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OT_ostta06g03990
03460 Fanconi anemia pathway
OT_ostta06g03990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta06g03990
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
OT_ostta06g03990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
34945928
NCBI-ProteinID:
XP_022839294
OrcAE:
OT_ostta06g03990
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Position
6:complement(680256..682745)
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AA seq
829 aa
AA seq
DB search
MLSSVPERSRAIKPIDRAVVHRITSGQVVVDLRSVCKELIENALDATARSIEVRFKDHGV
DVVEVSDDGRGVRRGDVGMLTTKYATSKLERFEDLEALRTFGFRGEALSSLCGVSGEFEV
TTRTEEDVAGLKIAYDGEGRVMSESTTARSVGTTVRVGRLFEPLPVRRKELIRNAKREYG
KALAIVQAYALVSKSVRILCTHQSGKYGRTNVLHTRGEDASVRENIVTVFGSKMIASMRE
IELELEVGTGVRVSGFISEPRSGCGRAGTDRQFYYVNGRPVDLPRAARVVNETYRSFNPN
QAPMVVLDFQLATNAYDVNVTPDKRKIMLHDEEAILAQMRDKLLEAFSPTRYTYAVTQEA
PASAEKASPLELSEQNGAEDDEDAEDETWTPAKGDDEETFAAVLRTASGQAEGSRGSKRD
SSARSIDAQRNLQTFGFTRDVTSVAIGGGWKIATTTQVSDEAMETEAPAKAETTTVSPSM
DEIEEDDEDAKRPRLEDTQKDEDERPSFAHVDVEFEDVGATVEELRRPDATEEILDDGSI
PFSMEDMLARRRNSHKRATAKQSAVKAFDSAHVSAADDDTAESTERATAAARELERVFDK
ADFAKMRIVGQFNLGFILATLGDDLFIIDQHASDEIYNFERLQRTTTLSKQPLIHPVPLD
LTASEEQTVLQNMPVFLKNGFGFCDVAESVPGADMNNSSVDPSARCGSLRLSAVPVLKNV
VFDKTDVHELVSMLDRGQHSLPANSQLSIGLTRHDQRGDSSSDVRVLRPAKTRAALAMKA
CRGSIMIGDALDARSMRRVLNNLTTLDAPWNCPHGRPTMRHLFALRRAF
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgtccgttccagagcgctcacgcgcgatcaaacccatcgatcgcgccgtggtc
catcgcatcaccagtggacaagtcgtcgtcgatcttcgctcggtgtgcaaggaattgatc
gaaaacgccctcgacgccaccgcgcgatcgatcgaagtgcggtttaaagatcacggcgtg
gacgtcgtcgaggtctcggacgacggccgaggggtgcggcggggagacgtggggatgctg
acgacgaaatacgcgacgagtaagctggagaggtttgaggatttggaggcgctgcgaacg
tttggatttcgaggcgaggcgctgagctcgttgtgtggagtatcgggagagtttgaggtc
acgacgaggacggaggaagatgtggcggggttgaagatcgcgtacgacggcgaggggagg
gtgatgagcgagagcacgacggcgaggtcggtggggacgacggttcgcgtcggacgattg
ttcgagccgctgccggtgcggaggaaggaactgattcgaaacgcgaagagggagtacggg
aaagcgttggcgatcgtgcaggcgtacgcgttggtctcgaagtccgtgaggatactgtgc
acgcaccagagcgggaaatatgggaggacgaacgtcttgcacacgcgcggagaggacgcg
agcgtgcgggaaaacatcgtcacggtttttgggtcgaagatgatcgcatccatgcgagag
atcgagctggagctcgaggtaggcactggtgtgcgcgtgagtgggttcatatccgagccg
cgctcgggatgcggacgcgcagggacggatcgacaattttattacgtcaacggtcggccc
gtcgatttaccacgcgccgcgcgagtggttaacgagacgtatcgctcgttcaatccgaat
caagcgcccatggtggtgctagattttcagctcgccacgaacgcgtacgacgtcaacgtg
acgccggacaagcgtaagattatgttacacgacgaggaggcgatactggcgcaaatgcgg
gacaagctcctagaggcgttttcgccaactagatacacgtatgctgtgacacaggaggcg
ccagcgagcgcagaaaaggcctcgcctttagaacttagtgaacaaaacggcgctgaggac
gatgaagacgccgaggacgaaacttggacgccggcaaagggtgacgacgaggagacgttt
gcggccgttttgcgcacggcgagcggtcaagcggagggctcgcgcggttcgaagagagat
tcttcggcacgaagcatcgacgcgcagaggaatttacaaactttcggatttactcgagac
gtcacgagcgtggcgatcggtggtgggtggaaaatagcgacgaccacgcaagtctctgac
gaagcgatggagactgaggcacccgcgaaggcggaaacgacgaccgtctcgccatcgatg
gacgagatagaagaggacgatgaagacgcaaaacgtccacgattagaagacactcagaag
gacgaggacgagcgcccgagcttcgcgcacgtcgacgttgagtttgaagacgtcggcgcc
acggttgaggaattgagaagaccagatgcgacagaggaaattttggacgatggatcgatt
ccattttccatggaagacatgcttgcgcgccggcgcaactctcacaaacgcgccacggcg
aaacagtcggccgttaaggcgtttgattccgcacacgtgtccgccgcagatgacgacacg
gcggaatcaacggagcgagccaccgccgcggcgagagagctcgagcgcgtcttcgacaag
gcagatttcgcaaagatgcgcattgtcggacagttcaaccttggattcattctcgccact
ctcggcgatgatctgttcatcatcgatcagcacgcgagcgatgagatatacaactttgag
cgtttgcagcgcacgacgacgctctccaagcagccgctcatccatcccgttccgctcgat
ctcaccgcaagtgaggagcagacggtgcttcagaacatgccggtgttcttgaagaacggt
ttcgggttctgcgacgtcgcggaatccgtcccgggtgcggacatgaacaactcctccgtg
gacccgagtgcacgatgcggctccttgcgtctctcagcagtgcccgtgctcaagaacgtc
gtcttcgacaaaacagacgtccacgagctcgtgtctatgctcgatagaggtcagcactct
ttaccagcgaactcgcagctctcgatcgggctcacgagacacgatcaacgtggggattcg
tcttccgacgtccgcgtgctccgtcccgcgaaaacccgcgcagcgctcgcgatgaaagcc
tgtcgcgggtccatcatgatcggcgacgccttggatgcgcgatcgatgcgaagggttttg
aataacctcaccacgctcgacgcgccttggaactgtccgcacggtcgtcccaccatgcgt
cacctctttgcgctccgtcgagcgttctga
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