KEGG   Ostreococcus tauri: OT_ostta07g01190
Entry
OT_ostta07g01190  CDS       T01358                                 
Name
(RefSeq) WD40/YVTN repeat-like-containing domain
  KO
K14962  COMPASS component SWD2
Organism
ota  Ostreococcus tauri
Pathway
ota03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    OT_ostta07g01190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ota03019]
    OT_ostta07g01190
   03036 Chromosome and associated proteins [BR:ota03036]
    OT_ostta07g01190
Messenger RNA biogenesis [BR:ota03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     OT_ostta07g01190
Chromosome and associated proteins [BR:ota03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     OT_ostta07g01190
    COMPASS/SET1 complex (yeast)
     OT_ostta07g01190
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd CFAP251_N WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_EIPR1 NBCH_WD40 Beta-prop_SCAP Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_Nup120_160 DSE1_N PAC11 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 9836861
NCBI-ProteinID: XP_003080212
OrcAE: OT_ostta07g01190
UniProt: A0A090M349
LinkDB
Position
7:complement(<167857..>168879)
AA seq 340 aa
MVALDVEAVSRMSPGRFFRDHTSAVNALDFHHTEDQMVTTGDDDAIHVYNTNTGAKTKTL
YSKKYGCANVTFTHSAAAVVYSSRAKGSGGAAIDDHAVRYHSLHDNTYVRYFKGHSDAVT
SIAMSATNDNFLTAGADLTVRLWDLRTPKCCAAIPQCPAIPYVAYDAQGEVFAVTEGDGA
IKLYGTGSYSKGAFAQFDAFHDRNGQYLFNPDEPPPAVSCVKFSSDGKRMLVVSGNFITI
LDSFTGEHTMRIRVPGSGQQQHAVTPMEASFSPDGEFVVSGGADSRIHVWSSNTGFAVSQ
WRARHAGLPTCVKWAPNMMLVASGCTEGGTALWISDKQRA
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggtcgccctcgacgtcgaggccgtctcgaggatgtcccccggtcgcttcttccgcgat
cacacgagcgcggtgaacgccctggactttcatcacaccgaggaccaaatggtgaccacc
ggggatgacgacgcgattcacgtctacaacaccaacaccggcgcgaaaacgaagacgctg
tacagcaaaaagtacgggtgcgccaacgtcacgttcacgcacagcgcggcggcggtggtg
tactcgtcgcgcgcgaaggggagcggcggcgcggcgatcgacgaccacgcggtgaggtat
cactcgctacacgacaacacgtacgtgcggtacttcaagggacacagcgatgcggtgacg
tcgatcgcgatgagcgcgacgaatgataatttcttaaccgcgggagcggatttgaccgtg
cgattgtgggatttgagaacgccaaagtgctgcgcggcgattccgcagtgtccggcgatc
ccgtacgtggcgtacgacgcccaaggtgaggtgttcgcggtgacggagggcgacggggcg
atcaaactgtacgggaccgggagctatagtaaaggggcgttcgcgcagttcgacgcattt
cacgacaggaacgggcagtatctgttcaacccagatgagccgccgccggcggtttcgtgc
gtcaagttttcgtcagacggtaaacgcatgctcgtcgtgagcgggaacttcatcacgatt
cttgactcattcacgggtgaacacacgatgcgaattcgcgtgcccggatcggggcagcag
cagcacgcggtgactcccatggaggcgagtttctcgcccgacggcgagttcgtcgtgagt
ggaggcgccgactcgcggatacacgtgtggagctcgaacaccggcttcgccgtctcgcag
tggcgagcgcgccacgccggattgccgacgtgcgtcaagtgggcgccaaacatgatgctt
gtcgccagcggttgcactgaaggtgggacagcgctgtggatctctgacaaacagcgtgct
tga

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