Ostreococcus tauri: OT_ostta07g01520
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Entry
OT_ostta07g01520 CDS
T01358
Name
(RefSeq) Nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ota
Ostreococcus tauri
Pathway
ota03013
Nucleocytoplasmic transport
ota03015
mRNA surveillance pathway
ota03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OT_ostta07g01520
09122 Translation
03013 Nucleocytoplasmic transport
OT_ostta07g01520
03015 mRNA surveillance pathway
OT_ostta07g01520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta07g01520
03041 Spliceosome [BR:
ota03041
]
OT_ostta07g01520
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
OT_ostta07g01520
Spliceosome [BR:
ota03041
]
Common components
Common spliceosomal components
Cap binding complex
OT_ostta07g01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G
MIF4G_like_2
Motif
Other DBs
NCBI-GeneID:
9836897
NCBI-ProteinID:
XP_022839393
OrcAE:
OT_ostta07g01520
UniProt:
A0A090N3S9
LinkDB
All DBs
Position
7:214649..217418
Genome browser
AA seq
790 aa
AA seq
DB search
MSHAKRARREDGSHGVDGPNEDDLRELRDVIIHCDGSADVLRGLSGDIAREGETLCEHAM
GFVMECVTELPVKTPVYATLVGLINATAGEFGGRVVEETKTALEEALNGGDLTQRTRARV
LTRFLVLLSTVGAVQRMDVMRYLDSLLKESQALAKKGATGWQPRADWLAYVALSALPWGG
EFLSKSECSNEFEGLLDAADAYCKTRSANPDPASVIVKSVDGTETDWFADMCARLSAAHT
DGIWKIASIPTIAEQFVEELASTTNAHALGDVTISTVEFASHAEAAARYPGRSMLRILDP
SFTEGTGNVDAWGPLERFVAEEYIVDTIWAFEPGYRRTATIPAAEQLASLPLPAEQPEQC
QFLVAETLFAELLALPEPTFSPVFYHIVIQDLCKIIPTFPPKMAKTAGMMFRSIDRMDVT
ARDRLASWLAHQVSCFDLVWPWSSWKHVMEQQEDAPQRAFVVDALKKLCQLSFIERVEKS
LIEELRPLLPTGRGVNAEYIAETAADPTFGKLQQMLAEKRQGYEVVQWIGSEGATMASPE
VLLRSLVVAALERGQKCITHHDVLLKRYAAPIRELVEKAGGEVAVDAAVGIWRGHYQMAP
IAVERLLALDLVAPSAVVNWVVQRAAVFGEDDTYEIASTVCDFVCASEASVVGKRSALVS
KIRAAEAEASGAGRAAEELSAQGRSYEAQQAAAAEAQAVEEIAQHEAELAATEAPIARAN
ALARETCLQLCGGLVKASAHGASAPVAERVLAFVRARRLQLALDTDAVIKAAGTKSIAKT
AVSHALGVPC
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacgcgaagcgcgcgcggcgtgaggacggctcgcacggcgttgatggaccgaac
gaggatgatcttcgagagctccgggacgtgatcattcactgcgacggctccgcggacgtc
ttacgcggcctctccggagacatcgcgcgcgagggtgaaacgctgtgcgagcacgcgatg
ggttttgtgatggagtgcgtcacggagctgccggtcaagacgccggtgtacgcgacgctg
gtggggttgatcaacgccaccgccggggagttcggtggacgcgtcgtggaggagacaaag
acggcgctcgaggaggcgctgaacgggggtgatctcacccagcgcactcgcgcgcgggtg
ttgacgaggtttttagtgctcctgagcactgtgggcgctgtgcaaaggatggacgtgatg
aggtatttggattcgctgctgaaggagtcgcaggcgctcgcgaagaagggcgcgacggga
tggcagccgcgggcagattggctcgcatacgtcgctctgtccgcgcttccgtggggtggg
gaattcttgtccaagtctgagtgctcgaacgagttcgagggactgttggacgcggcggac
gcgtactgcaagacgcgctccgccaatccagacccggcgtccgtcatcgttaagtctgtg
gacggcacggagacggattggttcgcggacatgtgcgctcgcctgagtgcggcgcacacg
gatggtatttggaagatcgcctccattcccaccattgccgagcaattcgtcgaggagttg
gcgagcacaaccaacgcgcatgctcttggagacgtgaccatttcgaccgtcgagttcgcg
agtcatgccgaagctgcggcgcgataccccggtcgatcgatgctaagaattttggacccg
agctttaccgagggcacgggtaatgtcgacgcgtggggtccgcttgagcgtttcgttgcg
gaggagtacatcgtggacaccatctgggcattcgagccaggatatcgtcgaactgcgacc
attccggccgctgagcagctggcgtcgcttcctcttcccgcagagcagcccgagcagtgt
cagttcttggtggctgagactttgtttgccgagttgcttgcgctcccagagccgacgttt
tcgcccgtcttctaccatatcgtcatccaagacttgtgcaagatcatccccacgttcccg
ccaaagatggcaaaaacggcgggtatgatgttcaggtcgatcgatcgcatggacgtgacc
gcgcgcgatcgtctcgcaagctggctcgcgcaccaagtttcgtgctttgatttggtttgg
ccctggtcgagctggaagcacgtgatggagcaacaggaggacgcaccccagcgcgcgttc
gtcgtggacgcactgaagaaattgtgccaactcagtttcatcgaacgcgttgaaaagagt
cttatcgaggagctccgaccgctcctgccaaccggtagaggcgtgaacgccgagtacatt
gccgagacggcggccgaccccacttttggaaagcttcagcaaatgctcgctgagaagcga
caggggtacgaggtcgtccaatggatcggctccgagggagcgactatggcaagtccggag
gttttgcttcgatcactcgtcgtcgccgcgctcgagcgcggacaaaagtgcatcacgcac
cacgacgttttgctcaagcgatacgccgcgccgattcgtgagttggttgaaaaggctggc
ggcgaggtcgccgtcgacgccgcggtcgggatctggcgtggtcactatcagatggcccct
atcgcggtcgaacgtttattagctcttgatttagtcgcgccatccgcggtggtgaactgg
gtggtgcagcgcgcggcggtgttcggcgaggatgacacgtacgagattgcatccaccgtg
tgtgacttcgtgtgcgcctccgaggcgagcgtggttggaaagcgaagtgcactggtgagt
aagattcgtgccgccgaggctgaggcctcgggtgctggtcgtgccgccgaggagctctct
gcccagggtcggtcgtacgaggcgcagcaagcggcagcagctgaggcacaggcggtggag
gagatcgcccaacacgaggctgagctcgccgccacagaggcgccgatcgctcgcgctaac
gcattggcgcgcgaaacctgcttacaactatgcggtggtctcgtcaaggcgagcgcgcac
ggcgcctctgcgcccgtcgccgagcgcgtcttggcctttgtccgcgcccgtcgcctccag
ctcgccctcgacactgacgccgtgatcaaggcggcgggaacgaagagcatcgccaagacc
gccgtctcacacgccctcggcgttccctgctag
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