KEGG   Ostreococcus tauri: OT_ostta07g01620
Entry
OT_ostta07g01620  CDS       T01358                                 
Name
(RefSeq) TH1 protein
  KO
K15181  negative elongation factor C/D
Organism
ota  Ostreococcus tauri
Pathway
ota03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    OT_ostta07g01620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ota03021]
    OT_ostta07g01620
Transcription machinery [BR:ota03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     OT_ostta07g01620
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 9836615
NCBI-ProteinID: XP_003080257
LinkDB
Position
7:complement(234901..236832)
AA seq 643 aa
MPSDSEVTHGCDRGDGDGGDDDARAGVPDEATTAVLEEIERRMRTKDFIMEPEAIDDVKR
YVAAGGAPSTAIETLSDNYRGYAAMTSLAVQWLRVTAPPRRGTCTSPMKTSGDSMAKEGR
RGESGEQETPQGPNADEDGGEASWGSDARFDEMYFLETLARERFDANKADAVFEGRPPAW
LDGLFRSERGRAVLFSLAEKNPNSLLISCAIQHAWQRGMRHEVRALGPAAAAYFSIFHEL
MADHINGIVVSGTDAVRRRELIERLKSMCCQSIGTYVFGQLMLASLGRDEDDATASVSRT
IAATLSEEIEEAAAKLHGAATVRRIAPWLATSAVDVSAKYATADLLSSRPVGSSYSADRT
RDIGALAAGDVKKLLEMYITSDEKPTVVPLRHPDVLYNLIAEAFKWTPDNVNRLRGECFE
LIALAAADENITCDEVKDALNAAVAVIEDAKLGKDLDKAQMEKVFNVPVASAGIVAAVRS
ALTCEAYHRVVQVGNTNEVLLQILADIARKHVALQGAVLEALTAVVNVCGRSHGDELVIA
LVDLGCELVAAGHVIPTITTACDSWRRSLEASQIRYFAEEVLEIAGPPYSRDFAVIMIHL
LDSSNYRKKMSKTVDEFVEEVALKRRELKLSLSEVNKLDHLLR
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgccgtccgattccgaggtcacgcacgggtgcgaccgcggtgacggcgacgggggcgat
gatgacgcgcgcgcgggcgtcccggacgaggcgacgacggcggtgctggaggagattgag
cgacgaatgcgaacgaaggatttcataatggaacccgaggcgatcgacgacgtgaagcgg
tacgtcgccgcgggtggggcgccgagcacggcgatcgagacgctgtcggataactaccga
gggtacgcggcgatgacgtcgttagcggtgcagtggttgcgagtgacggcgccgccgagg
cgcgggacgtgcacgtcgccgatgaagacgagcggcgattcgatggcgaaggaggggcgg
cgaggggaaagcggggagcaggaaacgccgcaggggccgaacgcggatgaggacggggga
gaggcgtcttggggttccgacgcacgattcgatgagatgtattttttggagacgctggcg
cgtgaacggttcgacgcgaataaggcggacgcggtgtttgagggacgaccaccggcgtgg
ttggacggacttttcaggagcgagcgaggacgggcggtgttgttctcactcgcggagaag
aatccgaattccttgctgatttcgtgcgcgattcagcacgcttggcaacgcggcatgaga
cacgaggtgcgcgcgctcggaccagcggcggcggcatacttcagcattttccacgaactt
atggccgatcacatcaacggaatcgtagtctccgggaccgatgctgtccgtcggcgtgaa
ttaatagagagattgaagagtatgtgttgccaatcgatcggcacgtacgtgtttgggcaa
ctcatgttggcgtcgttgggacgggacgaagacgatgccacagcttcagtgtcgcgcacc
atcgcggcaacgctgtcggaagagatcgaagaagcggcggcgaagctgcacggcgcggcg
acagtccgtcgcatcgcaccctggctcgctacgtcggccgtagatgtctcggcaaagtac
gccacggccgatttgctcagctcgcgaccggttggatcgagctattcggccgatcgcact
cgcgacatcggcgcgcttgcggcgggagatgtgaaaaagctgttagaaatgtatattacg
agcgacgaaaagcccacggtggtaccgcttcgacatccggatgtgctgtacaacctcatc
gcagaggcgtttaagtggaccccggacaatgtgaaccgtctacgcggtgaatgcttcgaa
cttattgcgctcgccgcagcggacgaaaatataacgtgcgatgaggtgaaagacgcgctc
aacgccgcggttgccgtgatcgaggatgccaagctcggcaaggatctggacaaggctcag
atggagaaggtgttcaatgtcccggttgcgtcggcgggtatcgtcgccgctgtgcgctct
gcgctcacgtgcgaggcgtatcatcgcgtcgtacaggttggaaacacgaatgaagtgctt
ttacaaatcctcgcggacatcgctcggaagcacgtcgcactccaaggcgccgtactcgag
gccttgacggctgtagtgaacgtgtgtggtcgctcgcacggcgacgaactcgtcatcgca
cttgtcgacttgggatgcgagctcgtcgctgcgggccacgtcatccccactattactacc
gcgtgcgactcttggcgtcgttcactggaggcgtcacagattcgttactttgcggaggag
gtgttggagatagccggaccaccgtacagtcgagactttgcggtgatcatgattcacctc
ttggactcgtccaattatcgaaagaaaatgtcgaaaaccgtggatgagttcgtggaagag
gttgctttgaagcgccgggagctcaagttgagcctatcggaggtgaataagttggaccat
cttttgagatga

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