Ostreococcus tauri: OT_ostta07g02820
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Entry
OT_ostta07g02820 CDS
T01358
Name
(RefSeq) Helicase, C-terminal
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ota
Ostreococcus tauri
Pathway
ota03013
Nucleocytoplasmic transport
ota03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OT_ostta07g02820
03015 mRNA surveillance pathway
OT_ostta07g02820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta07g02820
Enzymes [BR:
ota01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OT_ostta07g02820
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
OT_ostta07g02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
9836468
NCBI-ProteinID:
XP_003080375
OrcAE:
OT_ostta07g02820
UniProt:
Q014Y7
LinkDB
All DBs
Position
7:<455619..>457097
Genome browser
AA seq
492 aa
AA seq
DB search
MSAPWASDETTDLPPPPPGFEDVRAGAHGDAVDAIADSLRRTTDVGARAGVVDAPDLALK
SDGLREEHAGEVRKTIVDPSTPYSSAKTFEDLGLSAELLRGLYGEMKFEKPSKIQAETLP
LILMPPHRNLIAQAHNGSGKTTCFTLGMLSRIDPAVKTPQGLMICPTRELVVQNVSVMER
MGKYTGITIASTADPKWDNTNRNKIVDQAVIGTPGKILRWMRERQLACNNMKILVFDEAD
HMMATDGHRVDSTKILKHLSMSAKAWQVLLFSATFNEAVKSFATKVVPNANQIFIPATEL
SLDVIKQHRVVVNSVDAKDVLLKEKIFPLCDKIGQTIIFVRTREGARRLHASMNASGYKC
TVIEGQMEHSDRDRVVKEFRDGLTKILIATDVLSRGLDVSTVTLVINYDMPVEFHNPRSP
NYETYLHRIGRSGRFGKKGAAFNLILGDSERAICDQIELHFNHKIPEVHFNDDVTFEKVL
EDAGLMSKEEAL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgccctgggcctcggacgagaccacggatttacccccgcccccgcccgggttc
gaagacgtccgcgcgggcgcgcacggcgacgccgtggacgcgatcgcggattcactgcga
cgaaccaccgacgtgggcgcgcgcgctggggtggtcgacgccccggatctcgcgctcaag
agcgatggcttgcgggaagaacacgcgggggaggtgcggaagacgatcgtcgatccgtcc
acgccgtactcgagcgcgaagacgttcgaggatctgggcctgagcgcggagctcctgcgg
gggttgtacggggagatgaagtttgaaaagccgtcgaagattcaggcggagacgctgccg
ttgatcctgatgccgccgcataggaatttgatcgcgcaggcgcataacgggagtgggaag
acgacgtgctttacgttggggatgctgagccggattgatccggcggtgaagacgccgcag
gggttgatgatttgcccgacgcgcgagctggtggtgcaaaacgtgagcgtgatggaacgc
atggggaagtacaccgggataacgatcgcgagcacggcggatccgaagtgggataacacg
aatcgtaacaagattgtggatcaggcggtgatcgggacgccggggaaaattttgcgctgg
atgcgagagcgacaactggcgtgtaacaacatgaagatcctcgtcttcgacgaagcggat
cacatgatggccaccgatgggcatcgcgttgatagcacgaagatcttgaagcatctttcc
atgagcgccaaggcgtggcaggtcttgctctttagcgccacgtttaacgaggcggtgaag
agctttgcgacgaaagtcgtgcccaacgcaaaccaaatcttcatcccggccaccgagctt
tcgctcgatgtcatcaagcagcatcgcgtcgtggtgaactccgtggacgccaaagacgtg
ttgctcaaggagaagatcttcccgttgtgcgataagattggtcaaaccatcattttcgtt
cgcacgcgcgagggcgcgcgcagactccacgcgtcgatgaacgcaagcggatacaagtgc
actgtcatcgagggacagatggaacatagcgatcgcgaccgagtcgtgaaagagttccgt
gacggcttgaccaaaattctcatcgccaccgacgtgctctccagaggtttggacgtgagc
acggtgacgctcgtgatcaactacgacatgcccgtggagttccataacccgcgctcgcca
aattacgagacataccttcaccgcatcggtcgcagcgggcgcttcggtaaaaagggcgca
gcgttcaacctcatcctgggcgactctgaacgcgcgatttgcgatcagattgagttacac
ttcaatcacaagattcccgaggtgcacttcaacgacgacgtgacatttgaaaaagtgttg
gaagacgccggcctgatgtccaaggaagaggctctttag
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