Ostreococcus tauri: OT_ostta07g03380
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Entry
OT_ostta07g03380 CDS
T01358
Name
(RefSeq) Helicase, C-terminal
KO
K03257
translation initiation factor 4A
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta07g03380
03012 Translation factors [BR:
ota03012
]
OT_ostta07g03380
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ota04147
]
OT_ostta07g03380
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
OT_ostta07g03380
mRNA cycle factors
Stress granule specific factors
OT_ostta07g03380
Translation factors [BR:
ota03012
]
Eukaryotic type
Initiation factors
eIF-4
OT_ostta07g03380
Exosome [BR:
ota04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OT_ostta07g03380
Exosomal proteins of bladder cancer cells
OT_ostta07g03380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF8050
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
34946000
NCBI-ProteinID:
XP_022839470
OrcAE:
OT_ostta07g03380
UniProt:
A0A090M3I7
LinkDB
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Position
7:complement(<536896..>538137)
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AA seq
413 aa
AA seq
DB search
MSGEGGFDDTNYDRGMEELLREEKDEDGNAIITEWTEVHETFDTMNLQENLLRGIYAYGF
EKPSAIQQRGIVPFSKGLDVIQQAQSGTGKTATFCAGILQSLDYSVTECQALVLAPTREL
AQQIEKVMRALGDYLQVKCHACVGGTSVREDTRILQAGVHVIVGTPGRVYDMLRRRALKS
DHIKIFALDEADEMLSRGFKDQIYDIFTLLPPKVQVGVFSATLPPEALEITRKFMTKPVR
ILVKRDELTLEGIKQFYVNVDQEQWKLDTLCDLYETLAITQSVIFANTRRKVDWLTDNMR
ARDFTVSATHGDMDQNTRDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTSDDERLLQDIQRFYQTVIEELPSNVADLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgaaggaggattcgacgacaccaactacgaccgcggcatggaggaactcctc
cgcgaagagaaggatgaagacggaaacgcgatcatcacggaatggacggaagtccacgag
acgttcgacacgatgaacctccaagagaacttgctccgcgggatctacgcgtatggtttt
gaaaagccgtccgccattcagcaacgtggtattgtgccgttctccaagggtcttgacgtg
atccagcaggcgcaatccggtaccggtaagacggccactttctgcgccggtatcctccaa
tccttggactactccgtcaccgagtgccaagcgctcgtcttggcgccgacgcgggagttg
gcccagcaaatcgagaaggtcatgcgcgccctcggcgactaccttcaagtgaagtgccac
gcgtgcgtcggcggtacgtccgttcgtgaagatacccgcatcctccaagctggtgtccac
gtcatcgtcggtaccccgggtcgagtttacgacatgcttcgtcgtcgcgctttgaagagc
gaccacatcaagatctttgctcttgacgaagccgatgaaatgctttcccgaggtttcaag
gatcaaatctacgacatcttcaccttgctcccgccgaaggttcaagttggtgttttctcc
gcgacgcttccgccggaggcgctcgagatcacgcgcaagttcatgaccaagccggtgcgc
attttggtcaagcgtgacgaactcacccttgaaggtattaagcagttctacgtcaacgtc
gaccaggaacaatggaagctggacacgctctgcgatctgtacgaaacgctcgccattacg
cagtccgttatcttcgcgaacactcgtcgtaaggttgactggctcacggacaacatgcgt
gcccgcgatttcaccgtctccgccacgcacggtgatatggatcaaaacacccgtgacgtc
atcatgcgcgagttccgctccggctcgtcccgtgtgttgatcaccactgacttgcttgct
cgtggtatcgacgtccaacaagtttcgttggtgatcaactttgacttgcccacgcagccc
gaaaactaccttcaccgtatcggtcgttccggccgtttcggtcgtaagggtgtcgccatc
aactttgttacctccgacgacgaacgcctcctccaggacatccaacgtttctaccaaacg
gtcatcgaggaacttccctccaacgtcgctgatctcatctaa
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